Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX6-1P78426 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX6-1P78426 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.95□□□□□ -0.02
NKX6-1P78426 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 AC063926.3-201ENST00000624734 5658 ntBASIC14.95□□□□□ -0.02
NKX6-1P78426 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
NKX6-1P78426 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NKX6-1P78426 GNAS-203ENST00000306120 1878 ntBASIC14.95□□□□□ -0.02
NKX6-1P78426 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
NKX6-1P78426 LYSMD4-203ENST00000378904 2122 ntBASIC14.95□□□□□ -0.02
NKX6-1P78426 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
NKX6-1P78426 AC097637.2-201ENST00000624096 1997 ntBASIC14.94□□□□□ -0.02
NKX6-1P78426 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-1P78426 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-1P78426 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-1P78426 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX6-1P78426 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-1P78426 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-1P78426 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NKX6-1P78426 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NKX6-1P78426 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX6-1P78426 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-1P78426 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-1P78426 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-1P78426 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-1P78426 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX6-1P78426 CEND1P1-201ENST00000451006 455 ntBASIC14.94□□□□□ -0.02
NKX6-1P78426 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
NKX6-1P78426 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX6-1P78426 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.94□□□□□ -0.02
NKX6-1P78426 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.94□□□□□ -0.02
NKX6-1P78426 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX6-1P78426 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-1P78426 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX6-1P78426 MIR4751-201ENST00000578027 74 ntBASIC14.94□□□□□ -0.02
NKX6-1P78426 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.94□□□□□ -0.02
NKX6-1P78426 AC092865.6-201ENST00000642101 219 ntBASIC14.94□□□□□ -0.02
NKX6-1P78426 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-1P78426 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-1P78426 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.94□□□□□ -0.02
NKX6-1P78426 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
NKX6-1P78426 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.94□□□□□ -0.02
NKX6-1P78426 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-1P78426 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.94□□□□□ -0.02
NKX6-1P78426 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.94□□□□□ -0.02
NKX6-1P78426 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
NKX6-1P78426 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-1P78426 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX6-1P78426 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NKX6-1P78426 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX6-1P78426 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX6-1P78426 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 LINC00982-205ENST00000420957 435 ntBASIC14.93□□□□□ -0.02
NKX6-1P78426 ACTG1P4-201ENST00000425123 1122 ntBASIC14.93□□□□□ -0.02
NKX6-1P78426 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.93□□□□□ -0.02
NKX6-1P78426 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX6-1P78426 MKNK2P1-201ENST00000437526 628 ntBASIC14.93□□□□□ -0.02
NKX6-1P78426 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.93□□□□□ -0.02
NKX6-1P78426 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.93□□□□□ -0.02
NKX6-1P78426 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.93□□□□□ -0.02
NKX6-1P78426 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX6-1P78426 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.93□□□□□ -0.02
NKX6-1P78426 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX6-1P78426 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX6-1P78426 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 AL135999.2-201ENST00000622438 1686 ntBASIC14.93□□□□□ -0.02
NKX6-1P78426 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NKX6-1P78426 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX6-1P78426 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NKX6-1P78426 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.92□□□□□ -0.02
NKX6-1P78426 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX6-1P78426 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms