Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CLDN2P57739 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN2P57739 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN2P57739 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN2P57739 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN2P57739 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN2P57739 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN2P57739 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN2P57739 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CLDN2P57739 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN2P57739 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN2P57739 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN2P57739 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN2P57739 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN2P57739 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN2P57739 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN2P57739 FAM86GP-201ENST00000448322 971 ntBASIC16.62■□□□□ 0.25
CLDN2P57739 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN2P57739 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN2P57739 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CLDN2P57739 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN2P57739 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.62■□□□□ 0.25
CLDN2P57739 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN2P57739 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN2P57739 AP001350.2-201ENST00000625104 1094 ntBASIC16.62■□□□□ 0.25
CLDN2P57739 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.62■□□□□ 0.25
CLDN2P57739 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN2P57739 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN2P57739 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CLDN2P57739 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN2P57739 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN2P57739 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN2P57739 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.62■□□□□ 0.25
CLDN2P57739 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CLDN2P57739 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.62■□□□□ 0.25
CLDN2P57739 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN2P57739 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN2P57739 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CLDN2P57739 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLDN2P57739 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CLDN2P57739 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
CLDN2P57739 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.61■□□□□ 0.25
CLDN2P57739 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN2P57739 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN2P57739 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CLDN2P57739 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.61■□□□□ 0.25
CLDN2P57739 RBPMS2P1-201ENST00000437762 623 ntBASIC16.61■□□□□ 0.25
CLDN2P57739 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN2P57739 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN2P57739 LINC01225-203ENST00000563550 1244 ntBASIC16.61■□□□□ 0.25
CLDN2P57739 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN2P57739 CYP2A7P1-201ENST00000595391 815 ntBASIC16.61■□□□□ 0.25
CLDN2P57739 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN2P57739 PKD1P1-201ENST00000458669 6805 ntBASIC16.61■□□□□ 0.25
CLDN2P57739 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CLDN2P57739 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CLDN2P57739 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN2P57739 WASH6P-202ENST00000359512 1437 ntBASIC16.61■□□□□ 0.25
CLDN2P57739 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN2P57739 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN2P57739 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN2P57739 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLDN2P57739 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLDN2P57739 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLDN2P57739 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLDN2P57739 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN2P57739 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 AC016027.1-202ENST00000607927 1699 ntBASIC16.6■□□□□ 0.25
CLDN2P57739 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLDN2P57739 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN2P57739 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN2P57739 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms