Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMNB1P20700 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LMNB1P20700 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMNB1P20700 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMNB1P20700 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LMNB1P20700 AC009113.1-201ENST00000570267 2443 ntBASIC20.29■□□□□ 0.84
LMNB1P20700 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.29■□□□□ 0.84
LMNB1P20700 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.29■□□□□ 0.84
LMNB1P20700 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.29■□□□□ 0.84
LMNB1P20700 AC090164.3-201ENST00000610780 2143 ntBASIC20.29■□□□□ 0.84
LMNB1P20700 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LMNB1P20700 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.29■□□□□ 0.84
LMNB1P20700 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
LMNB1P20700 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.29■□□□□ 0.84
LMNB1P20700 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
LMNB1P20700 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LMNB1P20700 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.29■□□□□ 0.84
LMNB1P20700 SPDYE18-201ENST00000510091 1050 ntBASIC20.29■□□□□ 0.84
LMNB1P20700 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.29■□□□□ 0.84
LMNB1P20700 MPDU1-223ENST00000582151 728 ntBASIC20.29■□□□□ 0.84
LMNB1P20700 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.29■□□□□ 0.84
LMNB1P20700 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.29■□□□□ 0.84
LMNB1P20700 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.29■□□□□ 0.84
LMNB1P20700 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.29■□□□□ 0.84
LMNB1P20700 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.29■□□□□ 0.84
LMNB1P20700 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.29■□□□□ 0.84
LMNB1P20700 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LMNB1P20700 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LMNB1P20700 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.29■□□□□ 0.84
LMNB1P20700 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LMNB1P20700 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMNB1P20700 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMNB1P20700 FLJ13224-201ENST00000313737 1514 ntBASIC20.28■□□□□ 0.84
LMNB1P20700 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.28■□□□□ 0.84
LMNB1P20700 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMNB1P20700 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.28■□□□□ 0.84
LMNB1P20700 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMNB1P20700 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LMNB1P20700 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMNB1P20700 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LMNB1P20700 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.28■□□□□ 0.84
LMNB1P20700 HAUS4P1-201ENST00000406739 1145 ntBASIC20.28■□□□□ 0.84
LMNB1P20700 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LMNB1P20700 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.28■□□□□ 0.84
LMNB1P20700 AC004945.1-201ENST00000416738 983 ntBASIC20.28■□□□□ 0.84
LMNB1P20700 ACTBP11-201ENST00000436287 1126 ntBASIC20.28■□□□□ 0.84
LMNB1P20700 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.28■□□□□ 0.84
LMNB1P20700 AC007389.4-201ENST00000454674 793 ntBASIC20.28■□□□□ 0.84
LMNB1P20700 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMNB1P20700 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.28■□□□□ 0.84
LMNB1P20700 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.28■□□□□ 0.84
LMNB1P20700 AC044860.1-202ENST00000559481 777 ntBASIC20.28■□□□□ 0.84
LMNB1P20700 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LMNB1P20700 AL109936.8-201ENST00000641772 604 ntBASIC20.28■□□□□ 0.84
LMNB1P20700 AC104581.1-202ENST00000635932 2618 ntBASIC20.28■□□□□ 0.84
LMNB1P20700 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMNB1P20700 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMNB1P20700 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LMNB1P20700 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
LMNB1P20700 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.28■□□□□ 0.84
LMNB1P20700 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNB1P20700 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.27■□□□□ 0.84
LMNB1P20700 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.27■□□□□ 0.84
LMNB1P20700 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
LMNB1P20700 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LMNB1P20700 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.27■□□□□ 0.84
LMNB1P20700 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNB1P20700 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNB1P20700 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNB1P20700 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.27■□□□□ 0.84
LMNB1P20700 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.27■□□□□ 0.84
LMNB1P20700 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LMNB1P20700 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.27■□□□□ 0.84
LMNB1P20700 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LMNB1P20700 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LMNB1P20700 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.27■□□□□ 0.84
LMNB1P20700 KRT8P44-201ENST00000441609 1350 ntBASIC20.27■□□□□ 0.84
LMNB1P20700 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNB1P20700 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.27■□□□□ 0.84
LMNB1P20700 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.27■□□□□ 0.84
LMNB1P20700 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNB1P20700 AC092933.1-201ENST00000393644 945 ntBASIC20.27■□□□□ 0.84
LMNB1P20700 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LMNB1P20700 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.27■□□□□ 0.84
LMNB1P20700 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms