Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.21□□□□□ -0.13
CXCL3P19876 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CXCL3P19876 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.21□□□□□ -0.13
CXCL3P19876 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.21□□□□□ -0.14
CXCL3P19876 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL3P19876 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.21□□□□□ -0.14
CXCL3P19876 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL3P19876 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL3P19876 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.14
CXCL3P19876 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL3P19876 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CXCL3P19876 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL3P19876 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CXCL3P19876 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.21□□□□□ -0.14
CXCL3P19876 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.2□□□□□ -0.14
CXCL3P19876 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL3P19876 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.2□□□□□ -0.14
CXCL3P19876 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.2□□□□□ -0.14
CXCL3P19876 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL3P19876 MESTP1-201ENST00000404287 994 ntBASIC14.2□□□□□ -0.14
CXCL3P19876 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.2□□□□□ -0.14
CXCL3P19876 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL3P19876 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL3P19876 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL3P19876 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL3P19876 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.2□□□□□ -0.14
CXCL3P19876 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CXCL3P19876 AC073648.6-201ENST00000641589 218 ntBASIC14.2□□□□□ -0.14
CXCL3P19876 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CXCL3P19876 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CXCL3P19876 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.2□□□□□ -0.14
CXCL3P19876 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CXCL3P19876 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL3P19876 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL3P19876 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCL3P19876 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL3P19876 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCL3P19876 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL3P19876 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL3P19876 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL3P19876 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL3P19876 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCL3P19876 MFAP1P1-201ENST00000442257 1255 ntBASIC14.19□□□□□ -0.14
CXCL3P19876 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.19□□□□□ -0.14
CXCL3P19876 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.19□□□□□ -0.14
CXCL3P19876 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCL3P19876 AC006058.3-201ENST00000606217 1069 ntBASIC14.19□□□□□ -0.14
CXCL3P19876 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CXCL3P19876 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CXCL3P19876 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.19□□□□□ -0.14
CXCL3P19876 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CXCL3P19876 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.19□□□□□ -0.14
CXCL3P19876 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.19□□□□□ -0.14
CXCL3P19876 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CXCL3P19876 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CXCL3P19876 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms