Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CAPNS1P04632 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CAPNS1P04632 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.83■□□□□ 0.29
CAPNS1P04632 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CAPNS1P04632 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CAPNS1P04632 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.83■□□□□ 0.28
CAPNS1P04632 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CAPNS1P04632 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.83■□□□□ 0.28
CAPNS1P04632 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CAPNS1P04632 MIR149-201ENST00000384879 89 ntBASIC16.83■□□□□ 0.28
CAPNS1P04632 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CAPNS1P04632 MRPL20P1-201ENST00000400819 433 ntBASIC16.83■□□□□ 0.28
CAPNS1P04632 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CAPNS1P04632 HLA-V-201ENST00000429037 534 ntBASIC16.83■□□□□ 0.28
CAPNS1P04632 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.83■□□□□ 0.28
CAPNS1P04632 GAPDHP21-201ENST00000450301 1010 ntBASIC16.83■□□□□ 0.28
CAPNS1P04632 AC108073.2-201ENST00000464002 357 ntBASIC16.83■□□□□ 0.28
CAPNS1P04632 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CAPNS1P04632 AC109322.1-201ENST00000524499 1264 ntBASIC16.83■□□□□ 0.28
CAPNS1P04632 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CAPNS1P04632 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.83■□□□□ 0.28
CAPNS1P04632 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CAPNS1P04632 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.83■□□□□ 0.28
CAPNS1P04632 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.83■□□□□ 0.28
CAPNS1P04632 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.83■□□□□ 0.28
CAPNS1P04632 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CAPNS1P04632 SIGLEC16-201ENST00000599858 1437 ntBASIC16.83■□□□□ 0.28
CAPNS1P04632 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CAPNS1P04632 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CAPNS1P04632 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CAPNS1P04632 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPNS1P04632 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CAPNS1P04632 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPNS1P04632 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPNS1P04632 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CAPNS1P04632 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPNS1P04632 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CAPNS1P04632 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPNS1P04632 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPNS1P04632 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.82■□□□□ 0.28
CAPNS1P04632 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPNS1P04632 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPNS1P04632 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CAPNS1P04632 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.82■□□□□ 0.28
CAPNS1P04632 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.82■□□□□ 0.28
CAPNS1P04632 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.82■□□□□ 0.28
CAPNS1P04632 IGLL3P-201ENST00000412472 434 ntBASIC16.82■□□□□ 0.28
CAPNS1P04632 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPNS1P04632 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.82■□□□□ 0.28
CAPNS1P04632 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPNS1P04632 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPNS1P04632 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPNS1P04632 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.82■□□□□ 0.28
CAPNS1P04632 AC004706.3-202ENST00000621574 984 ntBASIC16.82■□□□□ 0.28
CAPNS1P04632 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPNS1P04632 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPNS1P04632 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CAPNS1P04632 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CAPNS1P04632 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CAPNS1P04632 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CAPNS1P04632 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.82■□□□□ 0.28
CAPNS1P04632 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.82■□□□□ 0.28
CAPNS1P04632 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPNS1P04632 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPNS1P04632 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CAPNS1P04632 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CAPNS1P04632 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CAPNS1P04632 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.81■□□□□ 0.28
CAPNS1P04632 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.81■□□□□ 0.28
CAPNS1P04632 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPNS1P04632 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPNS1P04632 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPNS1P04632 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.81■□□□□ 0.28
CAPNS1P04632 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPNS1P04632 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CAPNS1P04632 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.81■□□□□ 0.28
CAPNS1P04632 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPNS1P04632 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPNS1P04632 AC004461.1-201ENST00000412461 403 ntBASIC16.81■□□□□ 0.28
CAPNS1P04632 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.81■□□□□ 0.28
CAPNS1P04632 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.81■□□□□ 0.28
CAPNS1P04632 IGHV3-65-201ENST00000523210 341 ntBASIC16.81■□□□□ 0.28
CAPNS1P04632 AC025678.2-201ENST00000562061 970 ntBASIC16.81■□□□□ 0.28
CAPNS1P04632 AC004835.2-201ENST00000603762 682 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms