Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 AC096633.1-201ENST00000422446 749 ntBASIC15.25■□□□□ 0.03
HLA-DPB1P04440 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 CHCHD2P8-201ENST00000429873 447 ntBASIC15.25■□□□□ 0.03
HLA-DPB1P04440 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 RN7SL606P-201ENST00000472779 293 ntBASIC15.25■□□□□ 0.03
HLA-DPB1P04440 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 AC093458.2-201ENST00000623150 629 ntBASIC15.25■□□□□ 0.03
HLA-DPB1P04440 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 AC092364.2-201ENST00000596710 2692 ntBASIC15.25■□□□□ 0.03
HLA-DPB1P04440 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
HLA-DPB1P04440 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 KRT18P1-202ENST00000452408 1331 ntBASIC15.24■□□□□ 0.03
HLA-DPB1P04440 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 AC069148.1-201ENST00000608741 768 ntBASIC15.24■□□□□ 0.03
HLA-DPB1P04440 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPB1P04440 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 AL365203.3-201ENST00000609742 2057 ntBASIC15.23■□□□□ 0.03
HLA-DPB1P04440 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 HLA-A-202ENST00000376806 1854 ntBASIC15.23■□□□□ 0.03
HLA-DPB1P04440 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 PAUPAR-201ENST00000630360 2965 ntBASIC15.23■□□□□ 0.03
HLA-DPB1P04440 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPB1P04440 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms