Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHRNA1P02708 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.24■□□□□ 0.51
CHRNA1P02708 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA1P02708 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA1P02708 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA1P02708 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA1P02708 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA1P02708 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHRNA1P02708 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA1P02708 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
CHRNA1P02708 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CHRNA1P02708 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA1P02708 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA1P02708 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.24■□□□□ 0.51
CHRNA1P02708 TSSK5P-201ENST00000423978 907 ntBASIC18.24■□□□□ 0.51
CHRNA1P02708 AC027369.6-201ENST00000525520 931 ntBASIC18.24■□□□□ 0.51
CHRNA1P02708 AC003101.2-201ENST00000612557 442 ntBASIC18.24■□□□□ 0.51
CHRNA1P02708 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA1P02708 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA1P02708 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.24■□□□□ 0.51
CHRNA1P02708 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.24■□□□□ 0.51
CHRNA1P02708 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CHRNA1P02708 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA1P02708 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRNA1P02708 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 AC100757.3-201ENST00000622361 1406 ntBASIC18.23■□□□□ 0.51
CHRNA1P02708 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CHRNA1P02708 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CHRNA1P02708 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHRNA1P02708 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CHRNA1P02708 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.23■□□□□ 0.51
CHRNA1P02708 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CHRNA1P02708 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.23■□□□□ 0.51
CHRNA1P02708 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.23■□□□□ 0.51
CHRNA1P02708 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.23■□□□□ 0.51
CHRNA1P02708 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.23■□□□□ 0.51
CHRNA1P02708 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.23■□□□□ 0.51
CHRNA1P02708 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.23■□□□□ 0.51
CHRNA1P02708 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CHRNA1P02708 AC073592.8-201ENST00000624126 511 ntBASIC18.23■□□□□ 0.51
CHRNA1P02708 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CHRNA1P02708 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.23■□□□□ 0.51
CHRNA1P02708 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.23■□□□□ 0.51
CHRNA1P02708 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.23■□□□□ 0.51
CHRNA1P02708 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CHRNA1P02708 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CHRNA1P02708 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.23■□□□□ 0.51
CHRNA1P02708 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRNA1P02708 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA1P02708 AC067852.2-201ENST00000590513 2313 ntBASIC18.22■□□□□ 0.51
CHRNA1P02708 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.22■□□□□ 0.51
CHRNA1P02708 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CHRNA1P02708 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA1P02708 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.22■□□□□ 0.51
CHRNA1P02708 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRNA1P02708 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRNA1P02708 PRYP6-201ENST00000514804 343 ntBASIC18.22■□□□□ 0.51
CHRNA1P02708 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.22■□□□□ 0.51
CHRNA1P02708 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.22■□□□□ 0.51
CHRNA1P02708 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.22■□□□□ 0.51
CHRNA1P02708 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA1P02708 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRNA1P02708 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA1P02708 AC007967.4-201ENST00000614700 386 ntBASIC18.22■□□□□ 0.51
CHRNA1P02708 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRNA1P02708 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.22■□□□□ 0.51
CHRNA1P02708 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.22■□□□□ 0.51
CHRNA1P02708 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.22■□□□□ 0.51
CHRNA1P02708 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA1P02708 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA1P02708 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA1P02708 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.22■□□□□ 0.51
CHRNA1P02708 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CHRNA1P02708 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA1P02708 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA1P02708 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA1P02708 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CHRNA1P02708 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRNA1P02708 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA1P02708 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRNA1P02708 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms