Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 CRYGEP-201ENST00000412192 528 ntBASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 AC090340.1-201ENST00000620778 4980 ntBASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BLOC1S4Q9NUP1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 AC087641.1-201ENST00000557561 1021 ntBASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 AC010507.1-201ENST00000633895 436 ntBASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.75■□□□□ 0.59
BLOC1S4Q9NUP1 KRT8P39-201ENST00000396270 1433 ntBASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 RHOQP3-201ENST00000437982 621 ntBASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 KRT18P2-201ENST00000447938 1258 ntBASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BLOC1S4Q9NUP1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BLOC1S4Q9NUP1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms