Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC24.99■■□□□ 1.592e-7■□□□□ 8.2
DROSHAQ9NRR4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC23.19■■□□□ 1.32e-7■□□□□ 8.2
DROSHAQ9NRR4 HDAC7-222ENST00000477937 410 ntTSL 521.13■□□□□ 0.973e-16■□□□□ 8.2
DROSHAQ9NRR4 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.913e-16■□□□□ 8.2
DROSHAQ9NRR4 RPL27A-212ENST00000534599 651 ntTSL 520.27■□□□□ 0.842e-7■□□□□ 8.2
DROSHAQ9NRR4 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC20.15■□□□□ 0.822e-7■□□□□ 8.2
DROSHAQ9NRR4 HDAC7-221ENST00000477203 3122 ntTSL 219.24■□□□□ 0.673e-16■□□□□ 8.2
DROSHAQ9NRR4 HDAC7-228ENST00000548938 2719 ntTSL 519.23■□□□□ 0.673e-16■□□□□ 8.2
DROSHAQ9NRR4 GDI1-208ENST00000471972 534 ntTSL 218.6■□□□□ 0.573e-16■□□□□ 8.2
DROSHAQ9NRR4 GDI1-213ENST00000489589 918 ntTSL 218.4■□□□□ 0.543e-16■□□□□ 8.2
DROSHAQ9NRR4 HDAC7-217ENST00000459625 6414 ntTSL 217.77■□□□□ 0.433e-16■□□□□ 8.2
DROSHAQ9NRR4 HDAC7-230ENST00000552960 3216 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.353e-16■□□□□ 8.2
DROSHAQ9NRR4 HDAC7-219ENST00000470668 4266 ntTSL 217.14■□□□□ 0.333e-16■□□□□ 8.2
DROSHAQ9NRR4 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.333e-16■□□□□ 8.2
DROSHAQ9NRR4 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.333e-16■□□□□ 8.2
DROSHAQ9NRR4 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.333e-16■□□□□ 8.2
DROSHAQ9NRR4 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC17.09■□□□□ 0.332e-7■□□□□ 8.2
DROSHAQ9NRR4 RPL27A-207ENST00000530585 577 ntTSL 214.61□□□□□ -0.072e-7■□□□□ 8.2
DROSHAQ9NRR4 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.112e-7■□□□□ 8.2
DROSHAQ9NRR4 ARCN1-205ENST00000614498 2238 ntTSL 1 (best) BASIC13.83□□□□□ -0.22e-7■□□□□ 8.2
DROSHAQ9NRR4 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC13.09□□□□□ -0.312e-9■□□□□ 8.2
DROSHAQ9NRR4 RAB2A-206ENST00000481569 506 ntTSL 212.55□□□□□ -0.42e-7■□□□□ 8.2
DROSHAQ9NRR4 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC11.7□□□□□ -0.542e-7■□□□□ 8.2
DROSHAQ9NRR4 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC10.38□□□□□ -0.752e-7■□□□□ 8.2
DROSHAQ9NRR4 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.782e-7■□□□□ 8.2
DROSHAQ9NRR4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC9.33□□□□□ -0.922e-7■□□□□ 8.2
DROSHAQ9NRR4 PPP1R12A-216ENST00000550510 631 ntTSL 52.23□□□□□ -2.052e-9■□□□□ 8.2
DROSHAQ9NRR4 ARIH1-206ENST00000564062 612 ntTSL 348.48■■■■■ 5.354e-6■□□□□ 8.2
DROSHAQ9NRR4 ARIH1-210ENST00000570085 807 ntTSL 345.52■■■■■ 4.884e-6■□□□□ 8.2
DROSHAQ9NRR4 ZFAS1-207ENST00000458653 596 ntTSL 243.31■■■■■ 4.522e-6■□□□□ 8.2
DROSHAQ9NRR4 DRAP1-204ENST00000525501 695 ntTSL 542.4■■■■■ 4.382e-9■□□□□ 8.2
DROSHAQ9NRR4 PLEKHJ1-202ENST00000585423 494 ntTSL 241.14■■■■■ 4.183e-8■□□□□ 8.2
DROSHAQ9NRR4 CUL4A-211ENST00000498562 790 ntTSL 340.62■■■■■ 4.093e-7■□□□□ 8.2
DROSHAQ9NRR4 PLEKHJ1-203ENST00000586497 573 ntTSL 340.14■■■■■ 4.023e-8■□□□□ 8.2
DROSHAQ9NRR4 CUL4A-205ENST00000463426 893 ntTSL 340.08■■■■■ 4.013e-7■□□□□ 8.2
DROSHAQ9NRR4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.973e-8■□□□□ 8.2
DROSHAQ9NRR4 ZFAS1-202ENST00000371743 1008 ntTSL 1 (best)38.82■■■■□ 3.82e-6■□□□□ 8.2
DROSHAQ9NRR4 FAM222B-203ENST00000577376 720 ntTSL 238.7■■■■□ 3.781e-15■□□□□ 8.2
DROSHAQ9NRR4 MEIOB-207ENST00000496541 807 ntTSL 538.39■■■■□ 3.743e-8■□□□□ 8.2
DROSHAQ9NRR4 ZFAS1-203ENST00000417721 860 ntTSL 1 (best)38.03■■■■□ 3.682e-6■□□□□ 8.2
DROSHAQ9NRR4 MARK4-209ENST00000592762 683 ntTSL 537.96■■■■□ 3.674e-6■□□□□ 8.2
DROSHAQ9NRR4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC37.74■■■■□ 3.633e-8■□□□□ 8.2
DROSHAQ9NRR4 STX4-204ENST00000460668 842 ntTSL 337.61■■■■□ 3.613e-8■□□□□ 8.2
DROSHAQ9NRR4 STX4-212ENST00000496977 983 ntTSL 537.61■■■■□ 3.613e-8■□□□□ 8.2
DROSHAQ9NRR4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.593e-7■□□□□ 8.2
DROSHAQ9NRR4 PLEKHJ1-207ENST00000588356 610 ntTSL 437.3■■■■□ 3.563e-8■□□□□ 8.2
DROSHAQ9NRR4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC37.24■■■■□ 3.551e-15■□□□□ 8.2
DROSHAQ9NRR4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC36.27■■■■□ 3.43e-8■□□□□ 8.2
DROSHAQ9NRR4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.282e-9■□□□□ 8.2
DROSHAQ9NRR4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC35.44■■■■□ 3.263e-7■□□□□ 8.2
DROSHAQ9NRR4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC35.41■■■■□ 3.263e-8■□□□□ 8.2
DROSHAQ9NRR4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC34.95■■■■□ 3.193e-7■□□□□ 8.2
DROSHAQ9NRR4 STX4-210ENST00000487411 1290 ntTSL 1 (best)34.74■■■■□ 3.153e-8■□□□□ 8.2
DROSHAQ9NRR4 STRN3-207ENST00000555358 2208 ntTSL 1 (best)34.59■■■■□ 3.133e-7■□□□□ 8.2
DROSHAQ9NRR4 PSMD2-208ENST00000459910 676 ntTSL 534.48■■■■□ 3.112e-9■□□□□ 8.2
DROSHAQ9NRR4 FAM222B-206ENST00000579381 462 ntTSL 534.37■■■■□ 3.091e-15■□□□□ 8.2
DROSHAQ9NRR4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC34.37■■■■□ 3.091e-15■□□□□ 8.2
DROSHAQ9NRR4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC34.35■■■■□ 3.091e-15■□□□□ 8.2
DROSHAQ9NRR4 STX4-215ENST00000565483 846 ntTSL 534.03■■■■□ 3.043e-8■□□□□ 8.2
DROSHAQ9NRR4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.013e-7■□□□□ 8.2
DROSHAQ9NRR4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC33.69■■■□□ 2.983e-8■□□□□ 8.2
DROSHAQ9NRR4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC33.69■■■□□ 2.983e-8■□□□□ 8.2
DROSHAQ9NRR4 STX4-211ENST00000493902 1588 ntTSL 533.56■■■□□ 2.963e-8■□□□□ 8.2
DROSHAQ9NRR4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC33.56■■■□□ 2.963e-8■□□□□ 8.2
DROSHAQ9NRR4 FLOT1-208ENST00000470643 852 ntTSL 333.46■■■□□ 2.953e-7■□□□□ 8.2
DROSHAQ9NRR4 FLOT1-210ENST00000484168 1101 ntTSL 533.46■■■□□ 2.953e-7■□□□□ 8.2
DROSHAQ9NRR4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.943e-8■□□□□ 8.2
DROSHAQ9NRR4 STX4-203ENST00000457779 571 ntTSL 333.37■■■□□ 2.933e-8■□□□□ 8.2
DROSHAQ9NRR4 MEIOB-204ENST00000460494 605 ntTSL 333.26■■■□□ 2.923e-8■□□□□ 8.2
DROSHAQ9NRR4 STX4-216ENST00000566353 696 ntTSL 233.21■■■□□ 2.913e-8■□□□□ 8.2
DROSHAQ9NRR4 ZFAS1-205ENST00000441722 946 ntTSL 1 (best)33.14■■■□□ 2.92e-6■□□□□ 8.2
DROSHAQ9NRR4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC33.14■■■□□ 2.92e-6■□□□□ 8.2
DROSHAQ9NRR4 DRAP1-207ENST00000531121 672 ntTSL 332.98■■■□□ 2.872e-9■□□□□ 8.2
DROSHAQ9NRR4 RPL27-203ENST00000587478 584 ntTSL 232.81■■■□□ 2.842e-10■□□□□ 8.2
DROSHAQ9NRR4 FAM222B-207ENST00000581229 598 ntTSL 432.4■■■□□ 2.781e-15■□□□□ 8.2
DROSHAQ9NRR4 PSMD2-204ENST00000433010 942 ntTSL 332.08■■■□□ 2.732e-9■□□□□ 8.2
DROSHAQ9NRR4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC31.62■■■□□ 2.654e-6■□□□□ 8.2
DROSHAQ9NRR4 ABHD5-203ENST00000454293 464 ntTSL 331.58■■■□□ 2.654e-6■□□□□ 8.2
DROSHAQ9NRR4 ABHD5-207ENST00000486764 618 ntTSL 231.56■■■□□ 2.644e-6■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.632e-10■□□□□ 8.2
DROSHAQ9NRR4 TELO2-202ENST00000497339 1667 ntTSL 531.35■■■□□ 2.612e-12■□□□□ 8.2
DROSHAQ9NRR4 STX4-205ENST00000461455 1002 ntTSL 231.34■■■□□ 2.613e-8■□□□□ 8.2
DROSHAQ9NRR4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC31.29■■■□□ 2.63e-8■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-227ENST00000552902 869 ntTSL 231.18■■■□□ 2.582e-10■□□□□ 8.2
DROSHAQ9NRR4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.564e-6■□□□□ 8.2
DROSHAQ9NRR4 BIRC5-210ENST00000592115 1141 ntTSL 1 (best)30.94■■■□□ 2.542e-11■□□□□ 8.2
DROSHAQ9NRR4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC30.93■■■□□ 2.543e-7■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-222ENST00000551336 406 ntTSL 330.8■■■□□ 2.522e-10■□□□□ 8.2
DROSHAQ9NRR4 ZEB2-221ENST00000479735 543 ntTSL 430.79■■■□□ 2.521e-15■□□□□ 8.2
DROSHAQ9NRR4 TCF3-206ENST00000585855 1170 ntTSL 330.43■■■□□ 2.464e-6■□□□□ 8.2
DROSHAQ9NRR4 TCF3-213ENST00000590436 1149 ntTSL 530.43■■■□□ 2.464e-6■□□□□ 8.2
DROSHAQ9NRR4 FLOT1-211ENST00000484693 1001 ntTSL 230.17■■■□□ 2.423e-7■□□□□ 8.2
DROSHAQ9NRR4 RPLP0-223ENST00000551783 676 ntTSL 230.15■■■□□ 2.422e-10■□□□□ 8.2
DROSHAQ9NRR4 PSMD2-202ENST00000417952 721 ntTSL 330.1■■■□□ 2.412e-9■□□□□ 8.2
DROSHAQ9NRR4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC29.91■■■□□ 2.384e-6■□□□□ 8.2
DROSHAQ9NRR4 PSMD2-213ENST00000476461 816 ntTSL 329.87■■■□□ 2.372e-9■□□□□ 8.2
DROSHAQ9NRR4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.374e-6■□□□□ 8.2
DROSHAQ9NRR4 PILRB-204ENST00000438028 1822 ntTSL 1 (best)29.72■■■□□ 2.354e-6■□□□□ 8.2
DROSHAQ9NRR4 TCF3-219ENST00000610756 1343 ntTSL 1 (best)29.58■■■□□ 2.334e-6■□□□□ 8.2
DROSHAQ9NRR4 POLR2L-202ENST00000534030 585 ntTSL 429.55■■■□□ 2.323e-8■□□□□ 8.2
Retrieved 100 of 16,331 protein–RNA pairs in 409.2 ms