Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
VPS11Q9H270 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VPS11Q9H270 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS11Q9H270 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
VPS11Q9H270 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VPS11Q9H270 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS11Q9H270 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.07■□□□□ 0.32
VPS11Q9H270 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.06■□□□□ 0.32
VPS11Q9H270 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.06■□□□□ 0.32
VPS11Q9H270 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VPS11Q9H270 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS11Q9H270 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS11Q9H270 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VPS11Q9H270 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
VPS11Q9H270 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VPS11Q9H270 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
VPS11Q9H270 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.06■□□□□ 0.32
VPS11Q9H270 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.06■□□□□ 0.32
VPS11Q9H270 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.06■□□□□ 0.32
VPS11Q9H270 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.06■□□□□ 0.32
VPS11Q9H270 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.06■□□□□ 0.32
VPS11Q9H270 BX276092.5-203ENST00000456199 560 ntBASIC17.06■□□□□ 0.32
VPS11Q9H270 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.06■□□□□ 0.32
VPS11Q9H270 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.06■□□□□ 0.32
VPS11Q9H270 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.06■□□□□ 0.32
VPS11Q9H270 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.06■□□□□ 0.32
VPS11Q9H270 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.06■□□□□ 0.32
VPS11Q9H270 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.06■□□□□ 0.32
VPS11Q9H270 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.06■□□□□ 0.32
VPS11Q9H270 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.06■□□□□ 0.32
VPS11Q9H270 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VPS11Q9H270 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
VPS11Q9H270 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VPS11Q9H270 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS11Q9H270 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.06■□□□□ 0.32
VPS11Q9H270 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.06■□□□□ 0.32
VPS11Q9H270 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VPS11Q9H270 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
VPS11Q9H270 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.06■□□□□ 0.32
VPS11Q9H270 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS11Q9H270 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
VPS11Q9H270 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VPS11Q9H270 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
VPS11Q9H270 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS11Q9H270 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS11Q9H270 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS11Q9H270 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
VPS11Q9H270 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 AL645728.1-201ENST00000366221 2101 ntBASIC17.05■□□□□ 0.32
VPS11Q9H270 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.05■□□□□ 0.32
VPS11Q9H270 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.05■□□□□ 0.32
VPS11Q9H270 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS11Q9H270 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS11Q9H270 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.05■□□□□ 0.32
VPS11Q9H270 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS11Q9H270 AP005901.3-202ENST00000581653 237 ntBASIC17.05■□□□□ 0.32
VPS11Q9H270 NTF6B-201ENST00000591913 560 ntBASIC17.05■□□□□ 0.32
VPS11Q9H270 AC011467.2-201ENST00000598425 242 ntBASIC17.05■□□□□ 0.32
VPS11Q9H270 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 AD001527.2-201ENST00000622994 785 ntBASIC17.05■□□□□ 0.32
VPS11Q9H270 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS11Q9H270 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VPS11Q9H270 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
VPS11Q9H270 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.05■□□□□ 0.32
VPS11Q9H270 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS11Q9H270 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.04■□□□□ 0.32
VPS11Q9H270 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS11Q9H270 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS11Q9H270 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS11Q9H270 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VPS11Q9H270 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 AC132872.4-202ENST00000622924 2756 ntBASIC17.04■□□□□ 0.32
VPS11Q9H270 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS11Q9H270 AL391256.1-201ENST00000443260 1855 ntBASIC17.04■□□□□ 0.32
VPS11Q9H270 MTHFR-217ENST00000641820 1569 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms