Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 CYP2A7P1-201ENST00000595391 815 ntBASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 HLA-A-201ENST00000376802 1334 ntBASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCSER1Q9C0I3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 AL671710.1-201ENST00000610245 2349 ntBASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 HCG4-201ENST00000418983 998 ntBASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 FAM185BP-201ENST00000443595 716 ntBASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 AC108751.1-201ENST00000490852 363 ntBASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 AC087641.1-201ENST00000557561 1021 ntBASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 ACTL9-202ENST00000612068 1252 ntBASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 AL512652.2-201ENST00000625156 1716 ntBASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCSER1Q9C0I3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 AC009947.1-201ENST00000444350 727 ntBASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 AC093909.1-201ENST00000504731 1122 ntBASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 UNC93B6-202ENST00000528242 690 ntBASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 PCDHB19P-201ENST00000570871 2371 ntBASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCSER1Q9C0I3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCSER1Q9C0I3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms