Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 AC113404.2-201ENST00000507884 177 ntBASIC14.34□□□□□ -0.11
CLCC1Q96S66 HYMAI.1-201ENST00000620949 238 ntBASIC14.34□□□□□ -0.11
CLCC1Q96S66 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.34□□□□□ -0.11
CLCC1Q96S66 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCC1Q96S66 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.33□□□□□ -0.11
CLCC1Q96S66 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLCC1Q96S66 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CLCC1Q96S66 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLCC1Q96S66 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.33□□□□□ -0.11
CLCC1Q96S66 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.33□□□□□ -0.11
CLCC1Q96S66 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CLCC1Q96S66 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CLCC1Q96S66 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLCC1Q96S66 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCC1Q96S66 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCC1Q96S66 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLCC1Q96S66 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCC1Q96S66 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLCC1Q96S66 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLCC1Q96S66 MIR662-201ENST00000384847 95 ntBASIC14.33□□□□□ -0.12
CLCC1Q96S66 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 AC005332.3-201ENST00000589904 676 ntBASIC14.33□□□□□ -0.12
CLCC1Q96S66 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCC1Q96S66 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCC1Q96S66 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 LINC00304-203ENST00000565008 1864 ntBASIC14.33□□□□□ -0.12
CLCC1Q96S66 AL603756.1-201ENST00000606511 2163 ntBASIC14.33□□□□□ -0.12
CLCC1Q96S66 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCC1Q96S66 AL353692.3-201ENST00000407031 1396 ntBASIC14.33□□□□□ -0.12
CLCC1Q96S66 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCC1Q96S66 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.33□□□□□ -0.12
CLCC1Q96S66 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCC1Q96S66 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCC1Q96S66 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCC1Q96S66 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CLCC1Q96S66 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLCC1Q96S66 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCC1Q96S66 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.32□□□□□ -0.12
CLCC1Q96S66 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLCC1Q96S66 KRT89P-201ENST00000620027 1478 ntBASIC14.32□□□□□ -0.12
CLCC1Q96S66 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.32□□□□□ -0.12
CLCC1Q96S66 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CLCC1Q96S66 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCC1Q96S66 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCC1Q96S66 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLCC1Q96S66 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLCC1Q96S66 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCC1Q96S66 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms