Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 AC009093.7-201ENST00000623853 1223 ntBASIC18.29■□□□□ 0.52
PGBD4Q96DM1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.29■□□□□ 0.52
PGBD4Q96DM1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 AC243562.1-201ENST00000560672 389 ntBASIC18.28■□□□□ 0.52
PGBD4Q96DM1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PGBD4Q96DM1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 KRT8P49-201ENST00000604166 1432 ntBASIC18.27■□□□□ 0.52
PGBD4Q96DM1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 PMS2P4-201ENST00000412466 1052 ntBASIC18.27■□□□□ 0.52
PGBD4Q96DM1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 IGHV3-62-201ENST00000520057 340 ntBASIC18.27■□□□□ 0.52
PGBD4Q96DM1 AC109322.1-201ENST00000524499 1264 ntBASIC18.27■□□□□ 0.52
PGBD4Q96DM1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 AC093520.2-201ENST00000561830 333 ntBASIC18.27■□□□□ 0.52
PGBD4Q96DM1 MIR3909-201ENST00000579518 119 ntBASIC18.27■□□□□ 0.52
PGBD4Q96DM1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 MPDU1-223ENST00000582151 728 ntBASIC18.27■□□□□ 0.52
PGBD4Q96DM1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 AL031055.1-201ENST00000606362 631 ntBASIC18.27■□□□□ 0.52
PGBD4Q96DM1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 AC012313.1-201ENST00000593393 3059 ntBASIC18.27■□□□□ 0.52
PGBD4Q96DM1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PGBD4Q96DM1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
PGBD4Q96DM1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PGBD4Q96DM1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PGBD4Q96DM1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PGBD4Q96DM1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PGBD4Q96DM1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PGBD4Q96DM1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.27■□□□□ 0.51
PGBD4Q96DM1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
PGBD4Q96DM1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 SLC22A20-204ENST00000530038 1673 ntBASIC18.26■□□□□ 0.51
PGBD4Q96DM1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PGBD4Q96DM1 RNU1-129P-201ENST00000384064 167 ntBASIC18.26■□□□□ 0.51
PGBD4Q96DM1 MIR770-201ENST00000390219 98 ntBASIC18.26■□□□□ 0.51
PGBD4Q96DM1 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms