Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HIST1H1AQ02539 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 CHCHD2P8-201ENST00000429873 447 ntBASIC13.02□□□□□ -0.33
HIST1H1AQ02539 AC103564.2-201ENST00000432853 1299 ntBASIC13.02□□□□□ -0.33
HIST1H1AQ02539 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 NTF6B-201ENST00000591913 560 ntBASIC13.02□□□□□ -0.33
HIST1H1AQ02539 AC005336.2-201ENST00000593183 939 ntBASIC13.02□□□□□ -0.33
HIST1H1AQ02539 AL138831.2-201ENST00000606564 490 ntBASIC13.02□□□□□ -0.33
HIST1H1AQ02539 AC019129.2-201ENST00000609837 1235 ntBASIC13.02□□□□□ -0.33
HIST1H1AQ02539 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 LINC02012-201ENST00000608206 1725 ntBASIC13.02□□□□□ -0.33
HIST1H1AQ02539 AC093525.9-201ENST00000624961 1746 ntBASIC13.02□□□□□ -0.33
HIST1H1AQ02539 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HIST1H1AQ02539 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HIST1H1AQ02539 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms