Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL20P78556 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 CRYGFP-201ENST00000418459 633 ntBASIC13.35□□□□□ -0.27
CCL20P78556 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL20P78556 AC026366.1-201ENST00000488803 879 ntBASIC13.35□□□□□ -0.27
CCL20P78556 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.35□□□□□ -0.27
CCL20P78556 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL20P78556 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL20P78556 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CCL20P78556 AC024243.1-201ENST00000609234 778 ntBASIC13.35□□□□□ -0.27
CCL20P78556 ANKRD20A6P-201ENST00000618763 204 ntBASIC13.35□□□□□ -0.27
CCL20P78556 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCL20P78556 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL20P78556 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCL20P78556 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CCL20P78556 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CCL20P78556 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL20P78556 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL20P78556 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CCL20P78556 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CCL20P78556 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCL20P78556 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL20P78556 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCL20P78556 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL20P78556 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCL20P78556 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL20P78556 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL20P78556 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL20P78556 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL20P78556 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CCL20P78556 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.34□□□□□ -0.27
CCL20P78556 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL20P78556 AL353719.1-201ENST00000566847 864 ntBASIC13.34□□□□□ -0.27
CCL20P78556 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.34□□□□□ -0.27
CCL20P78556 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL20P78556 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCL20P78556 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL20P78556 AC026748.1-201ENST00000624349 3251 ntBASIC13.34□□□□□ -0.27
CCL20P78556 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCL20P78556 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CCL20P78556 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CCL20P78556 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCL20P78556 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CCL20P78556 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCL20P78556 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL20P78556 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL20P78556 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
CCL20P78556 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.33□□□□□ -0.27
CCL20P78556 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.27
CCL20P78556 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL20P78556 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
CCL20P78556 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL20P78556 AC063926.3-201ENST00000624734 5658 ntBASIC13.33□□□□□ -0.27
CCL20P78556 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CCL20P78556 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.33□□□□□ -0.27
CCL20P78556 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL20P78556 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL20P78556 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CCL20P78556 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL20P78556 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms