Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
IRX4P78413 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.66■□□□□ 0.42
IRX4P78413 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IRX4P78413 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.66■□□□□ 0.42
IRX4P78413 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.66■□□□□ 0.42
IRX4P78413 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
IRX4P78413 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.66■□□□□ 0.42
IRX4P78413 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
IRX4P78413 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.66■□□□□ 0.42
IRX4P78413 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IRX4P78413 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
IRX4P78413 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.66■□□□□ 0.42
IRX4P78413 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IRX4P78413 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.66■□□□□ 0.42
IRX4P78413 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.66■□□□□ 0.42
IRX4P78413 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
IRX4P78413 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
IRX4P78413 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.65■□□□□ 0.42
IRX4P78413 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
IRX4P78413 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
IRX4P78413 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
IRX4P78413 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
IRX4P78413 METTL21AP1-201ENST00000438852 635 ntBASIC17.65■□□□□ 0.42
IRX4P78413 AP006288.1-201ENST00000446065 395 ntBASIC17.65■□□□□ 0.42
IRX4P78413 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.65■□□□□ 0.42
IRX4P78413 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.65■□□□□ 0.42
IRX4P78413 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
IRX4P78413 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.65■□□□□ 0.42
IRX4P78413 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.65■□□□□ 0.42
IRX4P78413 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.65■□□□□ 0.42
IRX4P78413 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.65■□□□□ 0.42
IRX4P78413 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.65■□□□□ 0.42
IRX4P78413 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 AL118508.1-201ENST00000613502 2345 ntBASIC17.65■□□□□ 0.42
IRX4P78413 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IRX4P78413 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.65■□□□□ 0.42
IRX4P78413 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.65■□□□□ 0.42
IRX4P78413 AC008894.3-201ENST00000624324 3103 ntBASIC17.65■□□□□ 0.42
IRX4P78413 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
IRX4P78413 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
IRX4P78413 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.64■□□□□ 0.41
IRX4P78413 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.64■□□□□ 0.41
IRX4P78413 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
IRX4P78413 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.64■□□□□ 0.41
IRX4P78413 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
IRX4P78413 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
IRX4P78413 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
IRX4P78413 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.64■□□□□ 0.41
IRX4P78413 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.64■□□□□ 0.41
IRX4P78413 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.64■□□□□ 0.41
IRX4P78413 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.64■□□□□ 0.41
IRX4P78413 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.64■□□□□ 0.41
IRX4P78413 MIR3197-201ENST00000582241 73 ntBASIC17.64■□□□□ 0.41
IRX4P78413 AC064836.3-201ENST00000607928 673 ntBASIC17.64■□□□□ 0.41
IRX4P78413 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
IRX4P78413 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
IRX4P78413 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.64■□□□□ 0.41
IRX4P78413 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
IRX4P78413 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.63■□□□□ 0.41
IRX4P78413 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.63■□□□□ 0.41
IRX4P78413 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
IRX4P78413 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
IRX4P78413 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms