Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
WNT3AP56704 AC004790.2-201ENST00000623588 572 ntBASIC17.1■□□□□ 0.33
WNT3AP56704 HLA-A-201ENST00000376802 1334 ntBASIC17.1■□□□□ 0.33
WNT3AP56704 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.1■□□□□ 0.33
WNT3AP56704 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3AP56704 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3AP56704 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3AP56704 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.1■□□□□ 0.33
WNT3AP56704 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.1■□□□□ 0.33
WNT3AP56704 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3AP56704 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3AP56704 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3AP56704 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
WNT3AP56704 AC092171.3-201ENST00000610122 2651 ntBASIC17.1■□□□□ 0.33
WNT3AP56704 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
WNT3AP56704 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.1■□□□□ 0.33
WNT3AP56704 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
WNT3AP56704 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
WNT3AP56704 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.09■□□□□ 0.33
WNT3AP56704 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
WNT3AP56704 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
WNT3AP56704 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.09■□□□□ 0.33
WNT3AP56704 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.09■□□□□ 0.33
WNT3AP56704 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
WNT3AP56704 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.09■□□□□ 0.33
WNT3AP56704 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.09■□□□□ 0.33
WNT3AP56704 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
WNT3AP56704 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.09■□□□□ 0.33
WNT3AP56704 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
WNT3AP56704 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
WNT3AP56704 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.09■□□□□ 0.33
WNT3AP56704 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.09■□□□□ 0.33
WNT3AP56704 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.09■□□□□ 0.33
WNT3AP56704 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
WNT3AP56704 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.09■□□□□ 0.33
WNT3AP56704 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.09■□□□□ 0.33
WNT3AP56704 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.09■□□□□ 0.33
WNT3AP56704 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
WNT3AP56704 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
WNT3AP56704 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
WNT3AP56704 AC006277.1-201ENST00000624348 1610 ntBASIC17.09■□□□□ 0.33
WNT3AP56704 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.09■□□□□ 0.33
WNT3AP56704 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
WNT3AP56704 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
WNT3AP56704 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
WNT3AP56704 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
WNT3AP56704 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.09■□□□□ 0.33
WNT3AP56704 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.09■□□□□ 0.33
WNT3AP56704 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
WNT3AP56704 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.08■□□□□ 0.33
WNT3AP56704 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
WNT3AP56704 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
WNT3AP56704 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
WNT3AP56704 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
WNT3AP56704 PCDHA14-201ENST00000506751 2298 ntBASIC17.08■□□□□ 0.33
WNT3AP56704 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
WNT3AP56704 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
WNT3AP56704 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.08■□□□□ 0.33
WNT3AP56704 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
WNT3AP56704 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
WNT3AP56704 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.08■□□□□ 0.32
WNT3AP56704 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
WNT3AP56704 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
WNT3AP56704 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
WNT3AP56704 MRPL20P1-201ENST00000400819 433 ntBASIC17.08■□□□□ 0.32
WNT3AP56704 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.08■□□□□ 0.32
WNT3AP56704 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
WNT3AP56704 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.08■□□□□ 0.32
WNT3AP56704 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.08■□□□□ 0.32
WNT3AP56704 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.08■□□□□ 0.32
WNT3AP56704 OR7E47P-204ENST00000575924 449 ntBASIC17.08■□□□□ 0.32
WNT3AP56704 MPDU1-223ENST00000582151 728 ntBASIC17.08■□□□□ 0.32
WNT3AP56704 AC013467.2-201ENST00000605472 835 ntBASIC17.08■□□□□ 0.32
WNT3AP56704 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.08■□□□□ 0.32
WNT3AP56704 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.08■□□□□ 0.32
WNT3AP56704 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.08■□□□□ 0.32
WNT3AP56704 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.08■□□□□ 0.32
WNT3AP56704 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
WNT3AP56704 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
WNT3AP56704 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
WNT3AP56704 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
WNT3AP56704 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
WNT3AP56704 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
WNT3AP56704 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
WNT3AP56704 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.07■□□□□ 0.32
WNT3AP56704 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.07■□□□□ 0.32
WNT3AP56704 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
WNT3AP56704 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
WNT3AP56704 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
WNT3AP56704 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
WNT3AP56704 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
WNT3AP56704 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
WNT3AP56704 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
WNT3AP56704 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.07■□□□□ 0.32
WNT3AP56704 AC129492.6-201ENST00000611383 1305 ntBASIC17.07■□□□□ 0.32
WNT3AP56704 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
WNT3AP56704 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
WNT3AP56704 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
WNT3AP56704 AC108751.1-201ENST00000490852 363 ntBASIC17.07■□□□□ 0.32
WNT3AP56704 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms