Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.032e-8■□□□□ 9.2
NCBP2P52298 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.282e-8■□□□□ 9.2
NCBP2P52298 SSBP1-203ENST00000463093 600 ntTSL 512.61□□□□□ -0.392e-8■□□□□ 9.2
NCBP2P52298 SSBP1-206ENST00000467681 630 ntTSL 212.61□□□□□ -0.392e-8■□□□□ 9.2
NCBP2P52298 SSBP1-202ENST00000461433 1694 ntTSL 1 (best)10.5□□□□□ -0.732e-8■□□□□ 9.2
NCBP2P52298 SSBP1-208ENST00000469123 662 ntTSL 57.94□□□□□ -1.142e-8■□□□□ 9.2
NCBP2P52298 SSBP1-212ENST00000489378 1434 ntTSL 27.91□□□□□ -1.142e-8■□□□□ 9.2
NCBP2P52298 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.452e-8■□□□□ 9.2
NCBP2P52298 SSBP1-213ENST00000496622 2620 ntTSL 1 (best)5.7□□□□□ -1.52e-8■□□□□ 9.2
NCBP2P52298 SSBP1-204ENST00000465167 517 ntTSL 55.21□□□□□ -1.582e-8■□□□□ 9.2
NCBP2P52298 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.542e-19■□□□□ 9.2
NCBP2P52298 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.87■□□□□ 0.132e-19■□□□□ 9.2
NCBP2P52298 DYNC1LI2-212ENST00000568180 573 ntTSL 515.35■□□□□ 0.052e-19■□□□□ 9.2
NCBP2P52298 DYNC1LI2-206ENST00000564090 566 ntTSL 415.1■□□□□ 0.012e-19■□□□□ 9.2
NCBP2P52298 DYNC1LI2-210ENST00000566150 568 ntTSL 315.1■□□□□ 0.012e-19■□□□□ 9.2
NCBP2P52298 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.97□□□□□ -0.012e-19■□□□□ 9.2
NCBP2P52298 WDR34-202ENST00000419989 745 ntTSL 521.57■■□□□ 1.045e-6■□□□□ 9.2
NCBP2P52298 WDR34-205ENST00000480613 739 ntTSL 321.57■■□□□ 1.045e-6■□□□□ 9.2
NCBP2P52298 WDR34-203ENST00000451652 1039 ntTSL 219.77■□□□□ 0.765e-6■□□□□ 9.2
NCBP2P52298 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.465e-6■□□□□ 9.2
NCBP2P52298 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.61■■□□□ 1.051e-7■□□□□ 9.2
NCBP2P52298 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.261e-7■□□□□ 9.2
NCBP2P52298 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.31e-7■□□□□ 9.2
NCBP2P52298 CCDC138-202ENST00000409529 2364 ntTSL 212.43□□□□□ -0.421e-7■□□□□ 9.2
NCBP2P52298 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.471e-7■□□□□ 9.2
NCBP2P52298 CCDC138-204ENST00000447782 539 ntTSL 311.45□□□□□ -0.581e-7■□□□□ 9.2
NCBP2P52298 CCDC138-206ENST00000470608 427 ntTSL 31.7□□□□□ -2.141e-7■□□□□ 9.2
NCBP2P52298 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.85■□□□□ 0.938e-13■□□□□ 9.2
NCBP2P52298 CADM1-207ENST00000537140 1646 ntTSL 1 (best)20.84■□□□□ 0.938e-13■□□□□ 9.2
NCBP2P52298 CADM1-205ENST00000536781 575 ntTSL 418.11■□□□□ 0.498e-13■□□□□ 9.2
NCBP2P52298 CADM1-210ENST00000540951 572 ntTSL 318.11■□□□□ 0.498e-13■□□□□ 9.2
NCBP2P52298 DDX50-205ENST00000483593 1067 ntTSL 317.33■□□□□ 0.367e-8■□□□□ 9.2
NCBP2P52298 CADM1-218ENST00000545380 2373 ntTSL 1 (best)16.33■□□□□ 0.28e-13■□□□□ 9.2
NCBP2P52298 EPC1-205ENST00000469059 591 ntTSL 514.86□□□□□ -0.037e-10■□□□□ 9.2
NCBP2P52298 CADM1-211ENST00000541434 1112 ntTSL 1 (best)14.79□□□□□ -0.048e-13■□□□□ 9.2
NCBP2P52298 EPC1-208ENST00000480402 907 ntTSL 214.63□□□□□ -0.077e-10■□□□□ 9.2
NCBP2P52298 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.1□□□□□ -0.157e-8■□□□□ 9.2
NCBP2P52298 ST3GAL1-214ENST00000523854 626 ntTSL 313.95□□□□□ -0.187e-8■□□□□ 9.2
NCBP2P52298 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.267e-8■□□□□ 9.2
NCBP2P52298 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.327e-8■□□□□ 9.2
NCBP2P52298 ST3GAL1-204ENST00000519435 1050 ntTSL 312.75□□□□□ -0.377e-8■□□□□ 9.2
NCBP2P52298 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.59□□□□□ -0.398e-13■□□□□ 9.2
NCBP2P52298 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC11.68□□□□□ -0.548e-13■□□□□ 9.2
NCBP2P52298 CADM1-212ENST00000542447 4223 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.668e-13■□□□□ 9.2
NCBP2P52298 GOLPH3L-202ENST00000427665 973 ntTSL 310.92□□□□□ -0.667e-8■□□□□ 9.2
NCBP2P52298 EPC1-201ENST00000263062 2913 ntTSL 1 (best) BASIC10.81□□□□□ -0.687e-10■□□□□ 9.2
NCBP2P52298 GOLPH3L-203ENST00000479757 456 ntTSL 210.46□□□□□ -0.737e-8■□□□□ 9.2
NCBP2P52298 ST3GAL1-213ENST00000523634 895 ntTSL 29.91□□□□□ -0.827e-8■□□□□ 9.2
NCBP2P52298 EPC1-202ENST00000319778 4057 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.867e-10■□□□□ 9.2
NCBP2P52298 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.898e-13■□□□□ 9.2
NCBP2P52298 ST3GAL1-206ENST00000520020 574 ntTSL 38.31□□□□□ -1.087e-8■□□□□ 9.2
NCBP2P52298 ST3GAL1-205ENST00000519924 684 ntTSL 28.24□□□□□ -1.097e-8■□□□□ 9.2
NCBP2P52298 ST3GAL1-215ENST00000523855 741 ntTSL 37.12□□□□□ -1.277e-8■□□□□ 9.2
NCBP2P52298 DDX50-204ENST00000471475 888 ntTSL 56.32□□□□□ -1.47e-8■□□□□ 9.2
NCBP2P52298 CADM1-214ENST00000543249 565 ntTSL 45.53□□□□□ -1.528e-13■□□□□ 9.2
NCBP2P52298 ST3GAL1-208ENST00000521627 454 ntTSL 35.27□□□□□ -1.577e-8■□□□□ 9.2
NCBP2P52298 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.687e-8■□□□□ 9.2
NCBP2P52298 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.3□□□□□ -1.887e-10■□□□□ 9.2
NCBP2P52298 SLC25A37-201ENST00000290075 1889 ntTSL 1 (best)20.15■□□□□ 0.825e-17■□□□□ 9.2
NCBP2P52298 SLC25A37-202ENST00000417331 735 ntTSL 517.99■□□□□ 0.475e-17■□□□□ 9.2
NCBP2P52298 SLC25A37-205ENST00000519192 479 ntTSL 215.77■□□□□ 0.125e-17■□□□□ 9.2
NCBP2P52298 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.015e-17■□□□□ 9.2
NCBP2P52298 SLC25A37-204ENST00000518881 3404 ntTSL 1 (best)13.11□□□□□ -0.315e-17■□□□□ 9.2
NCBP2P52298 TTC3-223ENST00000492275 769 ntTSL 323.86■■□□□ 1.412e-13■□□□□ 9.2
NCBP2P52298 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.18■■□□□ 1.32e-13■□□□□ 9.2
NCBP2P52298 TTC3-212ENST00000463216 842 ntTSL 521.82■■□□□ 1.082e-13■□□□□ 9.2
NCBP2P52298 TTC3-224ENST00000494243 861 ntTSL 521.58■■□□□ 1.052e-13■□□□□ 9.2
NCBP2P52298 TTC3-217ENST00000481605 1540 ntTSL 521.36■■□□□ 1.012e-13■□□□□ 9.2
NCBP2P52298 TTC3-210ENST00000450533 2451 ntTSL 1 (best)20.95■□□□□ 0.942e-13■□□□□ 9.2
NCBP2P52298 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.763e-11■□□□□ 9.2
NCBP2P52298 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.631e-8■□□□□ 9.2
NCBP2P52298 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.29■□□□□ 0.362e-13■□□□□ 9.2
NCBP2P52298 TTC3-209ENST00000438055 3606 ntTSL 515.9■□□□□ 0.142e-13■□□□□ 9.2
NCBP2P52298 TTC3-207ENST00000418766 3771 ntTSL 515.44■□□□□ 0.062e-13■□□□□ 9.2
NCBP2P52298 FAM20B-202ENST00000440702 603 ntTSL 315.43■□□□□ 0.061e-8■□□□□ 9.2
NCBP2P52298 TTC3-219ENST00000485402 3626 ntTSL 513.85□□□□□ -0.192e-13■□□□□ 9.2
NCBP2P52298 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.441e-8■□□□□ 9.2
NCBP2P52298 WASL-201ENST00000223023 4435 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.487e-6■□□□□ 9.2
NCBP2P52298 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.6□□□□□ -0.551e-8■□□□□ 9.2
NCBP2P52298 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.882e-13■□□□□ 9.2
NCBP2P52298 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.892e-7■□□□□ 9.2
NCBP2P52298 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.78□□□□□ -0.042e-7■□□□□ 9.2
NCBP2P52298 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.172e-7■□□□□ 9.2
NCBP2P52298 GRSF1-204ENST00000505068 3561 ntTSL 212.66□□□□□ -0.382e-7■□□□□ 9.2
NCBP2P52298 EPS8L2-213ENST00000529346 1718 ntTSL 221.21■□□□□ 0.991e-6■□□□□ 9.2
NCBP2P52298 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.9■□□□□ 0.33e-6■□□□□ 9.2
NCBP2P52298 VPS39-210ENST00000568357 593 ntTSL 213.8□□□□□ -0.23e-6■□□□□ 9.2
NCBP2P52298 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC12.14□□□□□ -0.473e-6■□□□□ 9.2
NCBP2P52298 VPS39-201ENST00000318006 4844 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.643e-6■□□□□ 9.2
NCBP2P52298 BCL2L2-205ENST00000557236 631 ntTSL 518.02■□□□□ 0.488e-8■□□□□ 9.2
NCBP2P52298 BCL2L2-206ENST00000557579 596 ntTSL 314.08□□□□□ -0.168e-8■□□□□ 9.2
NCBP2P52298 BCL2L2-PABPN1-202ENST00000556100 655 ntTSL 312.58□□□□□ -0.48e-8■□□□□ 9.2
NCBP2P52298 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.418e-8■□□□□ 9.2
NCBP2P52298 BCL2L2-202ENST00000553824 548 ntTSL 411.36□□□□□ -0.598e-8■□□□□ 9.2
NCBP2P52298 ETNK1-203ENST00000538218 1659 ntTSL 1 (best)15.33■□□□□ 0.043e-6■□□□□ 9.2
NCBP2P52298 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.81□□□□□ -0.043e-6■□□□□ 9.2
NCBP2P52298 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.523e-6■□□□□ 9.2
NCBP2P52298 ACBD4-209ENST00000587976 589 ntTSL 319.61■□□□□ 0.737e-10■□□□□ 9.2
NCBP2P52298 ACBD4-206ENST00000586279 570 ntTSL 415.69■□□□□ 0.17e-10■□□□□ 9.2
NCBP2P52298 SLC25A10-207ENST00000574129 1523 ntTSL 529.15■■■□□ 2.263e-20■□□□□ 9.2
Retrieved 100 of 18,329 protein–RNA pairs in 262 ms