RNA–Protein interactions for RNA: ENST00000319778.10

EPC1-202, Transcript of enhancer of polycomb homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPC1, Length 4,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPC1-202ENST00000319778 NISCHQ9Y2I1 1504 aa19.43■□□□□ 0.7
EPC1-202ENST00000319778 DCAF8L2P0C7V8 631 aa18.44■□□□□ 0.54
EPC1-202ENST00000319778 SHROOM4Q9ULL8 1493 aa17.67■□□□□ 0.42
EPC1-202ENST00000319778 SUPT5HO00267 1087 aaKnown RBP17.5■□□□□ 0.39
EPC1-202ENST00000319778 EHMT2Q96KQ7 1210 aa16.62■□□□□ 0.25
EPC1-202ENST00000319778 ABCC9O60706 1549 aa16.55■□□□□ 0.24
EPC1-202ENST00000319778 FAM9AQ8IZU1 332 aaPredicted RBP16.39■□□□□ 0.21
EPC1-202ENST00000319778 TRIM41Q8WV44 630 aa16.19■□□□□ 0.18
EPC1-202ENST00000319778 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
EPC1-202ENST00000319778 ZCCHC6Q5VYS8 1495 aaKnown RBP16.16■□□□□ 0.18
EPC1-202ENST00000319778 CCDC180Q9P1Z9 1646 aa16.16■□□□□ 0.18
EPC1-202ENST00000319778 CHIC1Q5VXU3 224 aa16.01■□□□□ 0.15
EPC1-202ENST00000319778 RANGAP1P46060 587 aaPredicted RBP15.95■□□□□ 0.14
EPC1-202ENST00000319778 TTBK1Q5TCY1 1321 aaPredicted RBP15.95■□□□□ 0.14
EPC1-202ENST00000319778 SCRIBQ14160 1630 aa15.89■□□□□ 0.13
EPC1-202ENST00000319778 PCGF6Q9BYE7 350 aa15.88■□□□□ 0.13
EPC1-202ENST00000319778 LOC105371045A0A1W2PR82 267 aa15.86■□□□□ 0.13
EPC1-202ENST00000319778 UBTFP17480 764 aaKnown RBP15.79■□□□□ 0.12
EPC1-202ENST00000319778 APLP2Q06481 763 aa15.75■□□□□ 0.11
EPC1-202ENST00000319778 PPARGC1BQ86YN6 1023 aaKnown RBP15.7■□□□□ 0.1
EPC1-202ENST00000319778 ATP1B4Q9UN42 357 aaPredicted RBP15.57■□□□□ 0.08
EPC1-202ENST00000319778 RB1CC1Q8TDY2 1594 aa15.53■□□□□ 0.08
EPC1-202ENST00000319778 NACADO15069 1562 aa15.5■□□□□ 0.07
EPC1-202ENST00000319778 DCAF1Q9Y4B6 1507 aa15.48■□□□□ 0.07
EPC1-202ENST00000319778 RSF1Q96T23 1441 aaPredicted RBP15.43■□□□□ 0.06
EPC1-202ENST00000319778 CECR2Q9BXF3 1484 aa15.36■□□□□ 0.05
EPC1-202ENST00000319778 CCER1Q8TC90 406 aaPredicted RBP15.33■□□□□ 0.04
EPC1-202ENST00000319778 TRIM26Q12899 539 aaPredicted RBP15.33■□□□□ 0.04
EPC1-202ENST00000319778 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
EPC1-202ENST00000319778 ITGAEP38570 1179 aa15.18■□□□□ 0.02
EPC1-202ENST00000319778 HNRNPUL2Q1KMD3 747 aaKnown RBP15.14■□□□□ 0.01
EPC1-202ENST00000319778 MROH2BQ7Z745 1585 aa15.13■□□□□ 0.01
EPC1-202ENST00000319778 MYO15BQ96JP2 1530 aa15.13■□□□□ 0.01
EPC1-202ENST00000319778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.11■□□□□ 0.01
EPC1-202ENST00000319778 BAZ1AQ9NRL2 1556 aaPredicted RBP15.1■□□□□ 0.01
EPC1-202ENST00000319778 ZEB1P37275 1124 aaPredicted RBP15.09■□□□□ 0.01
EPC1-202ENST00000319778 HRCP23327 699 aa15.06■□□□□ 0
EPC1-202ENST00000319778 BAZ1BQ9UIG0 1483 aaKnown RBP15.04■□□□□ -0
EPC1-202ENST00000319778 P3H3Q8IVL6 736 aa15.02□□□□□ -0.01
EPC1-202ENST00000319778 FBLN2P98095 1184 aa15.01□□□□□ -0.01
EPC1-202ENST00000319778 WIZO95785 1651 aa14.93□□□□□ -0.02
EPC1-202ENST00000319778 WRNQ14191 1432 aaPredicted RBP eCLIP14.89□□□□□ -0.03
EPC1-202ENST00000319778 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
EPC1-202ENST00000319778 ARID3CA6NKF2 412 aa14.88□□□□□ -0.03
EPC1-202ENST00000319778 FAM50AQ14320 339 aaKnown RBP14.87□□□□□ -0.03
EPC1-202ENST00000319778 ABCC8Q09428 1581 aa14.79□□□□□ -0.04
EPC1-202ENST00000319778 AEBP2Q6ZN18 517 aaPredicted RBP14.78□□□□□ -0.04
EPC1-202ENST00000319778 SOGA1O94964 1423 aa14.76□□□□□ -0.05
EPC1-202ENST00000319778 SMARCA4P51532 1647 aa14.74□□□□□ -0.05
EPC1-202ENST00000319778 MYT1LQ9UL68 1186 aa14.74□□□□□ -0.05
EPC1-202ENST00000319778 ATAD2BQ9ULI0 1458 aa14.73□□□□□ -0.05
EPC1-202ENST00000319778 SMARCA2P51531 1590 aa14.72□□□□□ -0.05
EPC1-202ENST00000319778 TOP2AP11388 1531 aaKnown RBP14.72□□□□□ -0.05
EPC1-202ENST00000319778 YTHDC1Q96MU7 727 aaKnown RBP14.68□□□□□ -0.06
EPC1-202ENST00000319778 CLIP1P30622 1438 aa14.67□□□□□ -0.06
EPC1-202ENST00000319778 CEP162Q5TB80 1403 aa14.67□□□□□ -0.06
EPC1-202ENST00000319778 EEA1Q15075 1411 aa14.66□□□□□ -0.06
EPC1-202ENST00000319778 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
EPC1-202ENST00000319778 KIF27Q86VH2 1401 aa14.62□□□□□ -0.07
EPC1-202ENST00000319778 NEUROD1Q13562 356 aa14.62□□□□□ -0.07
EPC1-202ENST00000319778 TRIM52Q96A61 297 aa14.61□□□□□ -0.07
EPC1-202ENST00000319778 CHMP7Q8WUX9 453 aaPredicted RBP14.58□□□□□ -0.07
EPC1-202ENST00000319778 TNIKQ9UKE5 1360 aa14.58□□□□□ -0.08
EPC1-202ENST00000319778 CEP164Q9UPV0 1460 aa14.55□□□□□ -0.08
EPC1-202ENST00000319778 ZNF777Q9ULD5 760 aaPredicted RBP14.55□□□□□ -0.08
EPC1-202ENST00000319778 CENPBP07199 599 aaPredicted RBP14.55□□□□□ -0.08
EPC1-202ENST00000319778 CUX2O14529 1486 aa14.55□□□□□ -0.08
EPC1-202ENST00000319778 CADPSQ9ULU8 1353 aa14.54□□□□□ -0.08
EPC1-202ENST00000319778 POLR3GLQ9BT43 218 aa14.53□□□□□ -0.08
EPC1-202ENST00000319778 CNGB1Q14028 1251 aaPredicted RBP14.51□□□□□ -0.09
EPC1-202ENST00000319778 RUSC2Q8N2Y8 1516 aa14.51□□□□□ -0.09
EPC1-202ENST00000319778 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
EPC1-202ENST00000319778 DIEXFQ68CQ4 756 aaKnown RBP14.48□□□□□ -0.09
EPC1-202ENST00000319778 EIF4G1Q04637 1599 aaKnown RBP14.48□□□□□ -0.09
EPC1-202ENST00000319778 CARMIL1Q5VZK9 1371 aa14.47□□□□□ -0.09
EPC1-202ENST00000319778 TDRD9Q8NDG6 1382 aaKnown RBP14.47□□□□□ -0.09
EPC1-202ENST00000319778 CDK11AQ9UQ88 783 aaPredicted RBP14.46□□□□□ -0.09
EPC1-202ENST00000319778 BICRAQ9NZM4 1560 aa14.44□□□□□ -0.1
EPC1-202ENST00000319778 CHIC2Q9UKJ5 165 aa14.44□□□□□ -0.1
EPC1-202ENST00000319778 MTUS2Q5JR59 1369 aa14.42□□□□□ -0.1
EPC1-202ENST00000319778 NCAPD3P42695 1498 aa14.42□□□□□ -0.1
EPC1-202ENST00000319778 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
EPC1-202ENST00000319778 ZNF326Q5BKZ1 582 aaKnown RBP14.39□□□□□ -0.11
EPC1-202ENST00000319778 FANCD2Q9BXW9 1451 aa14.35□□□□□ -0.11
EPC1-202ENST00000319778 RAPGEF2Q9Y4G8 1499 aa14.35□□□□□ -0.11
EPC1-202ENST00000319778 DNAJC5BQ9UF47 199 aa14.34□□□□□ -0.11
EPC1-202ENST00000319778 ZNF316A6NFI3 1004 aaPredicted RBP14.32□□□□□ -0.12
EPC1-202ENST00000319778 KANK4Q5T7N3 995 aaPredicted RBP14.32□□□□□ -0.12
EPC1-202ENST00000319778 RRP7BPQ9NSQ0 103 aa14.28□□□□□ -0.12
EPC1-202ENST00000319778 UNC13AQ9UPW8 1703 aa14.28□□□□□ -0.12
EPC1-202ENST00000319778 PELP1Q8IZL8 1130 aaKnown RBP14.28□□□□□ -0.12
EPC1-202ENST00000319778 KCNH8Q96L42 1107 aa14.28□□□□□ -0.12
EPC1-202ENST00000319778 VPS8Q8N3P4 1428 aa14.27□□□□□ -0.13
EPC1-202ENST00000319778 NESP48681 1621 aa14.25□□□□□ -0.13
EPC1-202ENST00000319778 CC2D2AQ9P2K1 1620 aa14.25□□□□□ -0.13
EPC1-202ENST00000319778 RAD54L2Q9Y4B4 1467 aa14.23□□□□□ -0.13
EPC1-202ENST00000319778 PLEKHD1A6NEE1 506 aa14.23□□□□□ -0.13
EPC1-202ENST00000319778 NPM1P06748 294 aaKnown RBP eCLIP14.23□□□□□ -0.13
EPC1-202ENST00000319778 FGD5Q6ZNL6 1462 aa14.22□□□□□ -0.13
EPC1-202ENST00000319778 CFTRP13569 1480 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms