Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.29□□□□□ -0.12
COL8A2P25067 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
COL8A2P25067 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.29□□□□□ -0.12
COL8A2P25067 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.29□□□□□ -0.12
COL8A2P25067 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 AC124067.4-201ENST00000519691 2379 ntBASIC14.29□□□□□ -0.12
COL8A2P25067 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
COL8A2P25067 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
COL8A2P25067 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.28□□□□□ -0.12
COL8A2P25067 AC254562.1-201ENST00000417586 456 ntBASIC14.28□□□□□ -0.12
COL8A2P25067 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.28□□□□□ -0.12
COL8A2P25067 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.28□□□□□ -0.12
COL8A2P25067 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.28□□□□□ -0.12
COL8A2P25067 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.28□□□□□ -0.12
COL8A2P25067 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.28□□□□□ -0.12
COL8A2P25067 MIR4515-201ENST00000584082 81 ntBASIC14.28□□□□□ -0.12
COL8A2P25067 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
COL8A2P25067 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.28□□□□□ -0.12
COL8A2P25067 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
COL8A2P25067 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.28□□□□□ -0.12
COL8A2P25067 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.28□□□□□ -0.12
COL8A2P25067 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.28□□□□□ -0.12
COL8A2P25067 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.28□□□□□ -0.12
COL8A2P25067 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
COL8A2P25067 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.28□□□□□ -0.12
COL8A2P25067 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COL8A2P25067 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
COL8A2P25067 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL8A2P25067 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL8A2P25067 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL8A2P25067 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL8A2P25067 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
COL8A2P25067 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL8A2P25067 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL8A2P25067 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
COL8A2P25067 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL8A2P25067 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
COL8A2P25067 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
COL8A2P25067 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
COL8A2P25067 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL8A2P25067 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.27□□□□□ -0.13
COL8A2P25067 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.27□□□□□ -0.13
COL8A2P25067 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL8A2P25067 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
COL8A2P25067 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.27□□□□□ -0.13
COL8A2P25067 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
COL8A2P25067 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.27□□□□□ -0.13
COL8A2P25067 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.27□□□□□ -0.13
COL8A2P25067 AL645728.2-201ENST00000641974 660 ntBASIC14.27□□□□□ -0.13
COL8A2P25067 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
COL8A2P25067 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL8A2P25067 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL8A2P25067 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.27□□□□□ -0.13
COL8A2P25067 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
COL8A2P25067 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL8A2P25067 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL8A2P25067 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.27□□□□□ -0.13
COL8A2P25067 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL8A2P25067 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL8A2P25067 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL8A2P25067 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
COL8A2P25067 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL8A2P25067 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL8A2P25067 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
COL8A2P25067 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
COL8A2P25067 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL8A2P25067 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
COL8A2P25067 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL8A2P25067 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.27□□□□□ -0.13
COL8A2P25067 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
COL8A2P25067 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL8A2P25067 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COL8A2P25067 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.26□□□□□ -0.13
COL8A2P25067 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms