Protein–RNA interactions for Protein: P08922

ROS1, Proto-oncogene tyrosine-protein kinase ROS, humanhuman

Predictions only

Length 2,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROS1P08922 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
ROS1P08922 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ROS1P08922 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ROS1P08922 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ROS1P08922 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ROS1P08922 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.57□□□□□ -0.08
ROS1P08922 FRMD8P1-201ENST00000440433 1524 ntBASIC14.57□□□□□ -0.08
ROS1P08922 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ROS1P08922 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.57□□□□□ -0.08
ROS1P08922 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
ROS1P08922 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ROS1P08922 AC140658.5-201ENST00000438532 169 ntBASIC14.57□□□□□ -0.08
ROS1P08922 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.57□□□□□ -0.08
ROS1P08922 AL513480.1-201ENST00000451731 511 ntBASIC14.57□□□□□ -0.08
ROS1P08922 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.57□□□□□ -0.08
ROS1P08922 AC243562.1-201ENST00000560672 389 ntBASIC14.57□□□□□ -0.08
ROS1P08922 AL009183.1-201ENST00000603760 355 ntBASIC14.57□□□□□ -0.08
ROS1P08922 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ROS1P08922 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ROS1P08922 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.56□□□□□ -0.08
ROS1P08922 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ROS1P08922 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.56□□□□□ -0.08
ROS1P08922 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.56□□□□□ -0.08
ROS1P08922 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.56□□□□□ -0.08
ROS1P08922 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.56□□□□□ -0.08
ROS1P08922 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.56□□□□□ -0.08
ROS1P08922 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.56□□□□□ -0.08
ROS1P08922 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ROS1P08922 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 AC002056.1-201ENST00000395613 760 ntBASIC14.56□□□□□ -0.08
ROS1P08922 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.56□□□□□ -0.08
ROS1P08922 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
ROS1P08922 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.56□□□□□ -0.08
ROS1P08922 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.56□□□□□ -0.08
ROS1P08922 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.56□□□□□ -0.08
ROS1P08922 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.56□□□□□ -0.08
ROS1P08922 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.56□□□□□ -0.08
ROS1P08922 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.56□□□□□ -0.08
ROS1P08922 AC015911.4-201ENST00000588022 1070 ntBASIC14.56□□□□□ -0.08
ROS1P08922 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.56□□□□□ -0.08
ROS1P08922 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.56□□□□□ -0.08
ROS1P08922 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.56□□□□□ -0.08
ROS1P08922 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.56□□□□□ -0.08
ROS1P08922 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
ROS1P08922 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ROS1P08922 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.56□□□□□ -0.08
ROS1P08922 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.56□□□□□ -0.08
ROS1P08922 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ROS1P08922 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ROS1P08922 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.56□□□□□ -0.08
ROS1P08922 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ROS1P08922 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
ROS1P08922 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ROS1P08922 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.55□□□□□ -0.08
ROS1P08922 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.55□□□□□ -0.08
ROS1P08922 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.55□□□□□ -0.08
ROS1P08922 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.55□□□□□ -0.08
ROS1P08922 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ROS1P08922 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.55□□□□□ -0.08
ROS1P08922 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.55□□□□□ -0.08
ROS1P08922 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ROS1P08922 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ROS1P08922 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ROS1P08922 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ROS1P08922 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ROS1P08922 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ROS1P08922 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ROS1P08922 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ROS1P08922 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ROS1P08922 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms