Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN1P07384 KLF4P1-201ENST00000412782 1185 ntBASIC16.72■□□□□ 0.27
CAPN1P07384 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN1P07384 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.72■□□□□ 0.27
CAPN1P07384 NKAPP1-205ENST00000585790 367 ntBASIC16.72■□□□□ 0.27
CAPN1P07384 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CAPN1P07384 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN1P07384 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.72■□□□□ 0.27
CAPN1P07384 AL139288.1-201ENST00000623748 933 ntBASIC16.72■□□□□ 0.27
CAPN1P07384 AC073592.5-201ENST00000624854 528 ntBASIC16.72■□□□□ 0.27
CAPN1P07384 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN1P07384 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN1P07384 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CAPN1P07384 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CAPN1P07384 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CAPN1P07384 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CAPN1P07384 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.71■□□□□ 0.27
CAPN1P07384 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CAPN1P07384 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.71■□□□□ 0.27
CAPN1P07384 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN1P07384 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN1P07384 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.71■□□□□ 0.27
CAPN1P07384 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CAPN1P07384 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN1P07384 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN1P07384 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN1P07384 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN1P07384 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
CAPN1P07384 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN1P07384 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN1P07384 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.71■□□□□ 0.27
CAPN1P07384 PMS2P1-201ENST00000431037 1228 ntBASIC16.71■□□□□ 0.27
CAPN1P07384 RPS2P1-201ENST00000434010 821 ntBASIC16.71■□□□□ 0.27
CAPN1P07384 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.71■□□□□ 0.27
CAPN1P07384 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CAPN1P07384 AC106730.1-201ENST00000566722 1090 ntBASIC16.71■□□□□ 0.27
CAPN1P07384 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.71■□□□□ 0.27
CAPN1P07384 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN1P07384 RNF216P1-203ENST00000404404 2427 ntBASIC16.71■□□□□ 0.27
CAPN1P07384 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN1P07384 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN1P07384 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.71■□□□□ 0.27
CAPN1P07384 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN1P07384 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN1P07384 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN1P07384 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CAPN1P07384 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CAPN1P07384 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CAPN1P07384 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CAPN1P07384 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CAPN1P07384 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.7■□□□□ 0.26
CAPN1P07384 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CAPN1P07384 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CAPN1P07384 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.7■□□□□ 0.26
CAPN1P07384 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.7■□□□□ 0.26
CAPN1P07384 PMPCAP1-201ENST00000508114 1576 ntBASIC16.7■□□□□ 0.26
CAPN1P07384 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.7■□□□□ 0.26
CAPN1P07384 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.7■□□□□ 0.26
CAPN1P07384 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.7■□□□□ 0.26
CAPN1P07384 AC012640.2-201ENST00000561606 901 ntBASIC16.7■□□□□ 0.26
CAPN1P07384 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.7■□□□□ 0.26
CAPN1P07384 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CAPN1P07384 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.7■□□□□ 0.26
CAPN1P07384 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
CAPN1P07384 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CAPN1P07384 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.7■□□□□ 0.26
CAPN1P07384 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN1P07384 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CAPN1P07384 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.69■□□□□ 0.26
CAPN1P07384 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms