Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.07■□□□□ 0
CNOT4O95628 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNOT4O95628 AC099398.1-201ENST00000567919 2776 ntBASIC15.07■□□□□ 0
CNOT4O95628 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CNOT4O95628 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CNOT4O95628 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
CNOT4O95628 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.06■□□□□ 0
CNOT4O95628 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.06■□□□□ 0
CNOT4O95628 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.06■□□□□ 0
CNOT4O95628 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.06■□□□□ 0
CNOT4O95628 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.06■□□□□ 0
CNOT4O95628 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.06■□□□□ 0
CNOT4O95628 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CNOT4O95628 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.06■□□□□ 0
CNOT4O95628 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.06■□□□□ 0
CNOT4O95628 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.06■□□□□ 0
CNOT4O95628 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.06■□□□□ 0
CNOT4O95628 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.06■□□□□ 0
CNOT4O95628 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.06■□□□□ 0
CNOT4O95628 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CNOT4O95628 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 LINC02084-201ENST00000606069 1096 ntBASIC15.06■□□□□ 0
CNOT4O95628 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.06■□□□□ 0
CNOT4O95628 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.06■□□□□ 0
CNOT4O95628 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CNOT4O95628 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.06■□□□□ 0
CNOT4O95628 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.06■□□□□ 0
CNOT4O95628 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CNOT4O95628 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CNOT4O95628 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CNOT4O95628 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CNOT4O95628 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CNOT4O95628 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
CNOT4O95628 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CNOT4O95628 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.05■□□□□ 0
CNOT4O95628 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CNOT4O95628 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.05■□□□□ 0
CNOT4O95628 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.05■□□□□ 0
CNOT4O95628 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CNOT4O95628 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CNOT4O95628 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CNOT4O95628 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
CNOT4O95628 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.05■□□□□ -0
CNOT4O95628 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.05■□□□□ -0
CNOT4O95628 AC087163.2-201ENST00000457299 853 ntBASIC15.05■□□□□ -0
CNOT4O95628 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.05■□□□□ -0
CNOT4O95628 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.05■□□□□ -0
CNOT4O95628 AC096734.2-201ENST00000562054 433 ntBASIC15.05■□□□□ -0
CNOT4O95628 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
CNOT4O95628 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
CNOT4O95628 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.05■□□□□ -0
CNOT4O95628 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.05■□□□□ -0
CNOT4O95628 AC134684.3-201ENST00000641758 218 ntBASIC15.05■□□□□ -0
CNOT4O95628 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.05■□□□□ -0
CNOT4O95628 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CNOT4O95628 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
CNOT4O95628 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.05■□□□□ -0
CNOT4O95628 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CNOT4O95628 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CNOT4O95628 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CNOT4O95628 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.05■□□□□ -0
CNOT4O95628 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CNOT4O95628 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.05■□□□□ -0
CNOT4O95628 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.05■□□□□ -0
CNOT4O95628 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CNOT4O95628 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
CNOT4O95628 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
CNOT4O95628 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.04■□□□□ -0
CNOT4O95628 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.04■□□□□ -0
CNOT4O95628 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.04■□□□□ -0
CNOT4O95628 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
CNOT4O95628 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.04■□□□□ -0
CNOT4O95628 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.04■□□□□ -0
CNOT4O95628 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.04■□□□□ -0
CNOT4O95628 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms