Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.86□□□□□ -0.19
SSSCA1O60232 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.86□□□□□ -0.19
SSSCA1O60232 AC079602.3-201ENST00000623931 403 ntBASIC13.86□□□□□ -0.19
SSSCA1O60232 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
SSSCA1O60232 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.86□□□□□ -0.19
SSSCA1O60232 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SSSCA1O60232 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.86□□□□□ -0.19
SSSCA1O60232 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.86□□□□□ -0.19
SSSCA1O60232 GPR89P-201ENST00000407924 1495 ntBASIC13.86□□□□□ -0.19
SSSCA1O60232 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SSSCA1O60232 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.86□□□□□ -0.19
SSSCA1O60232 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SSSCA1O60232 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SSSCA1O60232 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.86□□□□□ -0.19
SSSCA1O60232 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SSSCA1O60232 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
SSSCA1O60232 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 MTHFR-217ENST00000641820 1569 ntBASIC13.85□□□□□ -0.19
SSSCA1O60232 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.85□□□□□ -0.19
SSSCA1O60232 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.85□□□□□ -0.19
SSSCA1O60232 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SSSCA1O60232 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 PRORSD1P-201ENST00000295112 541 ntBASIC13.85□□□□□ -0.19
SSSCA1O60232 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.85□□□□□ -0.19
SSSCA1O60232 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.85□□□□□ -0.19
SSSCA1O60232 AC098590.1-201ENST00000468126 897 ntBASIC13.85□□□□□ -0.19
SSSCA1O60232 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.85□□□□□ -0.19
SSSCA1O60232 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.85□□□□□ -0.19
SSSCA1O60232 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC13.85□□□□□ -0.19
SSSCA1O60232 Z99916.2-201ENST00000604037 246 ntBASIC13.85□□□□□ -0.19
SSSCA1O60232 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
SSSCA1O60232 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.85□□□□□ -0.19
SSSCA1O60232 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.85□□□□□ -0.19
SSSCA1O60232 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SSSCA1O60232 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.85□□□□□ -0.19
SSSCA1O60232 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 AC023824.1-201ENST00000562945 2975 ntBASIC13.85□□□□□ -0.19
SSSCA1O60232 TUBB8P12-201ENST00000308911 1335 ntBASIC13.85□□□□□ -0.19
SSSCA1O60232 TUBB7P-202ENST00000428444 1305 ntBASIC13.85□□□□□ -0.19
SSSCA1O60232 TUBB8P7-204ENST00000567960 1332 ntBASIC13.85□□□□□ -0.19
SSSCA1O60232 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.85□□□□□ -0.19
SSSCA1O60232 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SSSCA1O60232 MST1L-201ENST00000442552 2185 ntBASIC13.85□□□□□ -0.19
SSSCA1O60232 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.85□□□□□ -0.19
SSSCA1O60232 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSSCA1O60232 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.85□□□□□ -0.19
SSSCA1O60232 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.84□□□□□ -0.19
SSSCA1O60232 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SSSCA1O60232 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 AL353692.3-201ENST00000407031 1396 ntBASIC13.84□□□□□ -0.19
SSSCA1O60232 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.84□□□□□ -0.19
SSSCA1O60232 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.84□□□□□ -0.19
SSSCA1O60232 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.84□□□□□ -0.19
SSSCA1O60232 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SSSCA1O60232 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SSSCA1O60232 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.84□□□□□ -0.19
SSSCA1O60232 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SSSCA1O60232 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSSCA1O60232 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.84□□□□□ -0.19
SSSCA1O60232 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.84□□□□□ -0.19
SSSCA1O60232 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms