Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 AC009118.2-201ENST00000613275 655 ntBASIC11.24□□□□□ -0.61
RTL8CO15255 SRP9-204ENST00000619790 377 ntTSL 2 BASIC11.24□□□□□ -0.61
RTL8CO15255 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RTL8CO15255 LINC01451-201ENST00000623792 534 ntBASIC11.24□□□□□ -0.61
RTL8CO15255 AC008267.7-201ENST00000624570 1194 ntBASIC11.24□□□□□ -0.61
RTL8CO15255 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
RTL8CO15255 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
RTL8CO15255 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC11.24□□□□□ -0.61
RTL8CO15255 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RTL8CO15255 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RTL8CO15255 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RTL8CO15255 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
RTL8CO15255 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RTL8CO15255 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
RTL8CO15255 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.24□□□□□ -0.61
RTL8CO15255 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RTL8CO15255 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RTL8CO15255 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RTL8CO15255 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RTL8CO15255 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RTL8CO15255 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
RTL8CO15255 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC11.24□□□□□ -0.61
RTL8CO15255 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC11.24□□□□□ -0.61
RTL8CO15255 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC11.24□□□□□ -0.61
RTL8CO15255 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC11.24□□□□□ -0.61
RTL8CO15255 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RTL8CO15255 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
RTL8CO15255 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 MIR346-201ENST00000362234 95 ntBASIC11.23□□□□□ -0.61
RTL8CO15255 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.23□□□□□ -0.61
RTL8CO15255 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
RTL8CO15255 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
RTL8CO15255 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC11.23□□□□□ -0.61
RTL8CO15255 COQ4-205ENST00000609948 956 ntTSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
RTL8CO15255 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 AC100757.3-201ENST00000622361 1406 ntBASIC11.23□□□□□ -0.61
RTL8CO15255 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
RTL8CO15255 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC11.23□□□□□ -0.61
RTL8CO15255 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC11.22□□□□□ -0.61
RTL8CO15255 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC11.22□□□□□ -0.61
RTL8CO15255 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
RTL8CO15255 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
RTL8CO15255 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
RTL8CO15255 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms