Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 AC064862.7-201ENST00000604520 867 ntBASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 AL591684.3-201ENST00000605187 298 ntBASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 AC013467.2-201ENST00000605472 835 ntBASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 AC069148.1-201ENST00000608741 768 ntBASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.34■□□□□ 0.21
TUBB1Q9H4B7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TUBB1Q9H4B7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TUBB1Q9H4B7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TUBB1Q9H4B7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.33■□□□□ 0.21
TUBB1Q9H4B7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
TUBB1Q9H4B7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TUBB1Q9H4B7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TUBB1Q9H4B7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 AC132008.2-207ENST00000454517 770 ntBASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 SNX33P1-201ENST00000592116 1762 ntBASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TUBB1Q9H4B7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 AC132872.4-202ENST00000622924 2756 ntBASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.32■□□□□ 0.2
TUBB1Q9H4B7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TUBB1Q9H4B7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms