Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC104076.2-201ENST00000448912 469 ntBASIC10.17□□□□□ -0.78
LIMD2Q9BT23 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 AC011498.5-201ENST00000592027 486 ntBASIC10.17□□□□□ -0.78
LIMD2Q9BT23 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 AC124864.1-201ENST00000623408 392 ntBASIC10.17□□□□□ -0.78
LIMD2Q9BT23 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 FAM220CP-201ENST00000395253 831 ntBASIC10.16□□□□□ -0.78
LIMD2Q9BT23 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 AC009533.2-201ENST00000543664 586 ntBASIC10.16□□□□□ -0.78
LIMD2Q9BT23 NME3-204ENST00000563498 920 ntTSL 2 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 AC087388.1-201ENST00000571370 1112 ntBASIC10.16□□□□□ -0.78
LIMD2Q9BT23 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 Z69720.1-201ENST00000601483 472 ntBASIC10.16□□□□□ -0.78
LIMD2Q9BT23 HYMAI.1-201ENST00000620949 238 ntBASIC10.16□□□□□ -0.78
LIMD2Q9BT23 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 VPS72-207ENST00000640458 689 ntTSL 5 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
LIMD2Q9BT23 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms