Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEMA4DQ92854 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEMA4DQ92854 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SEMA4DQ92854 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SEMA4DQ92854 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEMA4DQ92854 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEMA4DQ92854 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SEMA4DQ92854 HLA-A-202ENST00000376806 1854 ntBASIC18.2■□□□□ 0.5
SEMA4DQ92854 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEMA4DQ92854 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 IL9RP2-201ENST00000423948 1312 ntBASIC18.2■□□□□ 0.5
SEMA4DQ92854 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.2■□□□□ 0.5
SEMA4DQ92854 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SEMA4DQ92854 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SEMA4DQ92854 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SEMA4DQ92854 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SEMA4DQ92854 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 IGLL3P-201ENST00000412472 434 ntBASIC18.19■□□□□ 0.5
SEMA4DQ92854 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SEMA4DQ92854 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SEMA4DQ92854 AC013467.2-201ENST00000605472 835 ntBASIC18.19■□□□□ 0.5
SEMA4DQ92854 ACTL9-202ENST00000612068 1252 ntBASIC18.19■□□□□ 0.5
SEMA4DQ92854 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SEMA4DQ92854 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SEMA4DQ92854 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SEMA4DQ92854 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
SEMA4DQ92854 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.18■□□□□ 0.5
SEMA4DQ92854 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.18■□□□□ 0.5
SEMA4DQ92854 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.18■□□□□ 0.5
SEMA4DQ92854 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.18■□□□□ 0.5
SEMA4DQ92854 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.18■□□□□ 0.5
SEMA4DQ92854 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SEMA4DQ92854 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.18■□□□□ 0.5
SEMA4DQ92854 PRSS29P-201ENST00000440800 595 ntBASIC18.18■□□□□ 0.5
SEMA4DQ92854 SLC25A1P1-201ENST00000528351 927 ntBASIC18.18■□□□□ 0.5
SEMA4DQ92854 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.18■□□□□ 0.5
SEMA4DQ92854 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.18■□□□□ 0.5
SEMA4DQ92854 AC034105.1-201ENST00000563488 319 ntBASIC18.18■□□□□ 0.5
SEMA4DQ92854 MIR4751-201ENST00000578027 74 ntBASIC18.18■□□□□ 0.5
SEMA4DQ92854 Z83851.2-201ENST00000609564 659 ntBASIC18.18■□□□□ 0.5
SEMA4DQ92854 AC010654.1-201ENST00000615722 808 ntBASIC18.18■□□□□ 0.5
SEMA4DQ92854 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 AL671710.1-201ENST00000610245 2349 ntBASIC18.18■□□□□ 0.5
SEMA4DQ92854 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.18■□□□□ 0.5
SEMA4DQ92854 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SEMA4DQ92854 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 AC129492.6-201ENST00000611383 1305 ntBASIC18.18■□□□□ 0.5
SEMA4DQ92854 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.18■□□□□ 0.5
SEMA4DQ92854 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SEMA4DQ92854 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SEMA4DQ92854 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.17■□□□□ 0.5
SEMA4DQ92854 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.17■□□□□ 0.5
SEMA4DQ92854 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.17■□□□□ 0.5
SEMA4DQ92854 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SEMA4DQ92854 AC104109.2-201ENST00000602919 1418 ntBASIC18.17■□□□□ 0.5
SEMA4DQ92854 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms