Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 GUSBP12-201ENST00000513727 720 ntBASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 AC005332.3-201ENST00000589904 676 ntBASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 GPR32P1-201ENST00000601788 811 ntBASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 IGHV3-41-201ENST00000613121 348 ntBASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 Z83836.1-201ENST00000624605 1642 ntBASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 AC016734.2-201ENST00000624325 1377 ntBASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
DEPDC4Q8N2C3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 AC092119.3-201ENST00000612618 583 ntBASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
DEPDC4Q8N2C3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
DEPDC4Q8N2C3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
DEPDC4Q8N2C3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
DEPDC4Q8N2C3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.83■□□□□ 0.13
DEPDC4Q8N2C3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
DEPDC4Q8N2C3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.83■□□□□ 0.13
DEPDC4Q8N2C3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
DEPDC4Q8N2C3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
DEPDC4Q8N2C3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.83■□□□□ 0.13
DEPDC4Q8N2C3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
DEPDC4Q8N2C3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 AC068587.6-202ENST00000641839 5619 ntBASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 PRELID1P1-202ENST00000567272 903 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms