Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 KRT18P38-201ENST00000449496 1282 ntBASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 AL596257.1-201ENST00000641463 2694 ntBASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 AC112907.2-201ENST00000448639 330 ntBASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 AC073912.3-201ENST00000624414 853 ntBASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUDCD3Q8IVD9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 AC105917.1-201ENST00000506637 2539 ntBASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 FLJ16779-201ENST00000612722 7638 ntBASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NUDCD3Q8IVD9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms