Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NIPAL3Q6P499 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
NIPAL3Q6P499 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 AC046158.3-201ENST00000624947 2558 ntBASIC15.46■□□□□ 0.07
NIPAL3Q6P499 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 AKR1C7P-201ENST00000305623 895 ntBASIC15.46■□□□□ 0.07
NIPAL3Q6P499 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 SPDYE21P-201ENST00000413323 827 ntBASIC15.46■□□□□ 0.07
NIPAL3Q6P499 AL450487.1-201ENST00000426799 995 ntBASIC15.46■□□□□ 0.07
NIPAL3Q6P499 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 SAPCD2P3-201ENST00000455031 850 ntBASIC15.46■□□□□ 0.07
NIPAL3Q6P499 SIGLEC30P-201ENST00000455569 941 ntBASIC15.46■□□□□ 0.07
NIPAL3Q6P499 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NIPAL3Q6P499 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.46■□□□□ 0.06
NIPAL3Q6P499 AC148477.5-201ENST00000625164 1645 ntBASIC15.46■□□□□ 0.06
NIPAL3Q6P499 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NIPAL3Q6P499 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.46■□□□□ 0.06
NIPAL3Q6P499 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
NIPAL3Q6P499 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 AC026691.1-201ENST00000602502 2017 ntBASIC15.45■□□□□ 0.06
NIPAL3Q6P499 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 AC079776.2-201ENST00000641154 1609 ntBASIC15.45■□□□□ 0.06
NIPAL3Q6P499 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NIPAL3Q6P499 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 FRMD8P1-201ENST00000440433 1524 ntBASIC15.44■□□□□ 0.06
NIPAL3Q6P499 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms