Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MTDHP5-201ENST00000598980 586 ntBASIC17.81■□□□□ 0.44
RNF43Q68DV7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 MIR1199-201ENST00000621445 119 ntBASIC17.81■□□□□ 0.44
RNF43Q68DV7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF43Q68DV7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF43Q68DV7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF43Q68DV7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 AC046185.3-201ENST00000623228 1824 ntBASIC17.81■□□□□ 0.44
RNF43Q68DV7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF43Q68DV7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF43Q68DV7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF43Q68DV7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 AC097637.2-201ENST00000624096 1997 ntBASIC17.8■□□□□ 0.44
RNF43Q68DV7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF43Q68DV7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF43Q68DV7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF43Q68DV7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF43Q68DV7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF43Q68DV7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 METTL21AP1-201ENST00000438852 635 ntBASIC17.8■□□□□ 0.44
RNF43Q68DV7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF43Q68DV7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF43Q68DV7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 AC008667.4-201ENST00000607370 168 ntBASIC17.8■□□□□ 0.44
RNF43Q68DV7 AC005593.1-201ENST00000624894 515 ntBASIC17.8■□□□□ 0.44
RNF43Q68DV7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF43Q68DV7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF43Q68DV7 AC008894.3-201ENST00000624324 3103 ntBASIC17.8■□□□□ 0.44
RNF43Q68DV7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF43Q68DV7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 AL135999.2-201ENST00000622438 1686 ntBASIC17.8■□□□□ 0.44
RNF43Q68DV7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF43Q68DV7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF43Q68DV7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF43Q68DV7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF43Q68DV7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 AL596442.2-201ENST00000610240 980 ntBASIC17.79■□□□□ 0.44
RNF43Q68DV7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF43Q68DV7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF43Q68DV7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms