Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SSRP1Q08945 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
SSRP1Q08945 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.65■□□□□ 0.74
SSRP1Q08945 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SSRP1Q08945 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.65■□□□□ 0.74
SSRP1Q08945 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SSRP1Q08945 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.65■□□□□ 0.74
SSRP1Q08945 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.65■□□□□ 0.74
SSRP1Q08945 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.65■□□□□ 0.74
SSRP1Q08945 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.65■□□□□ 0.74
SSRP1Q08945 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SSRP1Q08945 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.65■□□□□ 0.74
SSRP1Q08945 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.65■□□□□ 0.74
SSRP1Q08945 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.65■□□□□ 0.74
SSRP1Q08945 HLA-A-201ENST00000376802 1334 ntBASIC19.65■□□□□ 0.74
SSRP1Q08945 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SSRP1Q08945 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SSRP1Q08945 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SSRP1Q08945 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SSRP1Q08945 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SSRP1Q08945 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.65■□□□□ 0.74
SSRP1Q08945 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.65■□□□□ 0.74
SSRP1Q08945 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.65■□□□□ 0.74
SSRP1Q08945 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
SSRP1Q08945 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.64■□□□□ 0.74
SSRP1Q08945 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SSRP1Q08945 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSRP1Q08945 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SSRP1Q08945 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSRP1Q08945 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SSRP1Q08945 AC098831.1-202ENST00000438821 336 ntBASIC19.64■□□□□ 0.73
SSRP1Q08945 AC108073.2-201ENST00000464002 357 ntBASIC19.64■□□□□ 0.73
SSRP1Q08945 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.64■□□□□ 0.73
SSRP1Q08945 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.64■□□□□ 0.73
SSRP1Q08945 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.64■□□□□ 0.73
SSRP1Q08945 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SSRP1Q08945 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.64■□□□□ 0.73
SSRP1Q08945 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.64■□□□□ 0.73
SSRP1Q08945 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SSRP1Q08945 AC004790.2-201ENST00000623588 572 ntBASIC19.64■□□□□ 0.73
SSRP1Q08945 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SSRP1Q08945 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSRP1Q08945 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.64■□□□□ 0.73
SSRP1Q08945 LINC00895-201ENST00000629028 1637 ntBASIC19.64■□□□□ 0.73
SSRP1Q08945 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.64■□□□□ 0.73
SSRP1Q08945 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SSRP1Q08945 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSRP1Q08945 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSRP1Q08945 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSRP1Q08945 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSRP1Q08945 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.64■□□□□ 0.73
SSRP1Q08945 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.64■□□□□ 0.73
SSRP1Q08945 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.64■□□□□ 0.73
SSRP1Q08945 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SSRP1Q08945 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSRP1Q08945 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.63■□□□□ 0.73
SSRP1Q08945 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.63■□□□□ 0.73
SSRP1Q08945 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SSRP1Q08945 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.63■□□□□ 0.73
SSRP1Q08945 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.63■□□□□ 0.73
SSRP1Q08945 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SSRP1Q08945 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.63■□□□□ 0.73
SSRP1Q08945 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.63■□□□□ 0.73
SSRP1Q08945 MRPL20P1-201ENST00000400819 433 ntBASIC19.63■□□□□ 0.73
SSRP1Q08945 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.63■□□□□ 0.73
SSRP1Q08945 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.63■□□□□ 0.73
SSRP1Q08945 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.63■□□□□ 0.73
SSRP1Q08945 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SSRP1Q08945 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSRP1Q08945 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms