Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
YBX1P67809 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
YBX1P67809 GPR89P-201ENST00000407924 1495 ntBASIC16.54■□□□□ 0.24
YBX1P67809 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.54■□□□□ 0.24
YBX1P67809 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.53■□□□□ 0.24
YBX1P67809 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.53■□□□□ 0.24
YBX1P67809 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.53■□□□□ 0.24
YBX1P67809 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
YBX1P67809 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.53■□□□□ 0.24
YBX1P67809 RPS15P9-201ENST00000494093 319 ntBASIC16.53■□□□□ 0.24
YBX1P67809 AC136632.2-201ENST00000512891 861 ntBASIC16.53■□□□□ 0.24
YBX1P67809 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.53■□□□□ 0.24
YBX1P67809 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
YBX1P67809 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
YBX1P67809 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.53■□□□□ 0.24
YBX1P67809 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.53■□□□□ 0.24
YBX1P67809 AC006449.5-201ENST00000610658 2098 ntBASIC16.53■□□□□ 0.24
YBX1P67809 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.53■□□□□ 0.24
YBX1P67809 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
YBX1P67809 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
YBX1P67809 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
YBX1P67809 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
YBX1P67809 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.52■□□□□ 0.24
YBX1P67809 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
YBX1P67809 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
YBX1P67809 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
YBX1P67809 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
YBX1P67809 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.52■□□□□ 0.24
YBX1P67809 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.52■□□□□ 0.24
YBX1P67809 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
YBX1P67809 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
YBX1P67809 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
YBX1P67809 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
YBX1P67809 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
YBX1P67809 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.52■□□□□ 0.24
YBX1P67809 RPS2P28-201ENST00000314255 741 ntBASIC16.52■□□□□ 0.24
YBX1P67809 AL590627.1-203ENST00000421194 1026 ntBASIC16.52■□□□□ 0.24
YBX1P67809 AP000347.1-202ENST00000435868 847 ntBASIC16.52■□□□□ 0.24
YBX1P67809 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.52■□□□□ 0.24
YBX1P67809 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.52■□□□□ 0.24
YBX1P67809 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.52■□□□□ 0.24
YBX1P67809 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.52■□□□□ 0.24
YBX1P67809 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.52■□□□□ 0.24
YBX1P67809 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.52■□□□□ 0.24
YBX1P67809 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
YBX1P67809 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.52■□□□□ 0.23
YBX1P67809 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.52■□□□□ 0.23
YBX1P67809 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
YBX1P67809 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.52■□□□□ 0.23
YBX1P67809 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
YBX1P67809 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.52■□□□□ 0.23
YBX1P67809 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
YBX1P67809 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
YBX1P67809 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
YBX1P67809 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
YBX1P67809 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
YBX1P67809 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.52■□□□□ 0.23
YBX1P67809 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.52■□□□□ 0.23
YBX1P67809 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.51■□□□□ 0.23
YBX1P67809 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.51■□□□□ 0.23
YBX1P67809 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
YBX1P67809 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 FRMD8P1-201ENST00000440433 1524 ntBASIC16.51■□□□□ 0.23
YBX1P67809 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
YBX1P67809 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
YBX1P67809 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.51■□□□□ 0.23
YBX1P67809 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
YBX1P67809 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.51■□□□□ 0.23
YBX1P67809 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.51■□□□□ 0.23
YBX1P67809 RNA5SP415-201ENST00000517246 115 ntBASIC16.51■□□□□ 0.23
YBX1P67809 UNC93B6-202ENST00000528242 690 ntBASIC16.51■□□□□ 0.23
YBX1P67809 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.51■□□□□ 0.23
YBX1P67809 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.51■□□□□ 0.23
YBX1P67809 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.51■□□□□ 0.23
YBX1P67809 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms