Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CDH11P55287 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH11P55287 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH11P55287 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH11P55287 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CDH11P55287 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH11P55287 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH11P55287 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH11P55287 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH11P55287 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDH11P55287 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.59■□□□□ 0.09
CDH11P55287 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
CDH11P55287 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDH11P55287 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.58■□□□□ 0.09
CDH11P55287 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.58■□□□□ 0.09
CDH11P55287 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CDH11P55287 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH11P55287 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
CDH11P55287 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.58■□□□□ 0.09
CDH11P55287 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
CDH11P55287 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH11P55287 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDH11P55287 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH11P55287 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH11P55287 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH11P55287 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH11P55287 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH11P55287 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH11P55287 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CDH11P55287 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH11P55287 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH11P55287 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH11P55287 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDH11P55287 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH11P55287 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.58■□□□□ 0.08
CDH11P55287 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.58■□□□□ 0.08
CDH11P55287 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH11P55287 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CDH11P55287 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
CDH11P55287 AL353801.3-201ENST00000609898 542 ntBASIC15.58■□□□□ 0.08
CDH11P55287 AL031008.1-201ENST00000619963 541 ntBASIC15.58■□□□□ 0.08
CDH11P55287 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDH11P55287 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH11P55287 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH11P55287 AC097374.2-201ENST00000618617 1306 ntBASIC15.58■□□□□ 0.08
CDH11P55287 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH11P55287 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH11P55287 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH11P55287 KRT8P10-201ENST00000450021 1447 ntBASIC15.58■□□□□ 0.08
CDH11P55287 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH11P55287 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDH11P55287 AC006449.5-201ENST00000610658 2098 ntBASIC15.58■□□□□ 0.08
CDH11P55287 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH11P55287 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH11P55287 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH11P55287 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.58■□□□□ 0.08
CDH11P55287 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
CDH11P55287 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDH11P55287 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDH11P55287 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.58■□□□□ 0.08
CDH11P55287 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDH11P55287 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH11P55287 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH11P55287 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH11P55287 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH11P55287 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH11P55287 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH11P55287 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH11P55287 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH11P55287 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
CDH11P55287 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH11P55287 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH11P55287 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH11P55287 KRT16P4-201ENST00000453883 522 ntBASIC15.57■□□□□ 0.08
CDH11P55287 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH11P55287 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH11P55287 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.57■□□□□ 0.08
CDH11P55287 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH11P55287 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH11P55287 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CDH11P55287 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH11P55287 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDH11P55287 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CDH11P55287 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDH11P55287 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH11P55287 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH11P55287 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.57■□□□□ 0.08
CDH11P55287 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH11P55287 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.57■□□□□ 0.08
CDH11P55287 LINC02199-201ENST00000506655 2702 ntBASIC15.57■□□□□ 0.08
CDH11P55287 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CDH11P55287 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH11P55287 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDH11P55287 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH11P55287 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CDH11P55287 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH11P55287 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH11P55287 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms