Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDK7P50613 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK7P50613 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CDK7P50613 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK7P50613 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK7P50613 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK7P50613 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDK7P50613 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDK7P50613 COX5BP8-201ENST00000416911 349 ntBASIC18.64■□□□□ 0.57
CDK7P50613 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDK7P50613 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.64■□□□□ 0.57
CDK7P50613 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.64■□□□□ 0.57
CDK7P50613 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.64■□□□□ 0.57
CDK7P50613 AC073592.8-201ENST00000624126 511 ntBASIC18.64■□□□□ 0.57
CDK7P50613 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDK7P50613 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.64■□□□□ 0.57
CDK7P50613 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDK7P50613 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CDK7P50613 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK7P50613 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK7P50613 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK7P50613 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CDK7P50613 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CDK7P50613 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK7P50613 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.64■□□□□ 0.57
CDK7P50613 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDK7P50613 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.64■□□□□ 0.57
CDK7P50613 AC090340.1-201ENST00000620778 4980 ntBASIC18.63■□□□□ 0.57
CDK7P50613 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CDK7P50613 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.63■□□□□ 0.57
CDK7P50613 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.63■□□□□ 0.57
CDK7P50613 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.63■□□□□ 0.57
CDK7P50613 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.63■□□□□ 0.57
CDK7P50613 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.63■□□□□ 0.57
CDK7P50613 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CDK7P50613 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.63■□□□□ 0.57
CDK7P50613 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CDK7P50613 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK7P50613 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.63■□□□□ 0.57
CDK7P50613 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDK7P50613 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.62■□□□□ 0.57
CDK7P50613 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK7P50613 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK7P50613 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK7P50613 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK7P50613 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CDK7P50613 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
CDK7P50613 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK7P50613 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.62■□□□□ 0.57
CDK7P50613 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.62■□□□□ 0.57
CDK7P50613 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.62■□□□□ 0.57
CDK7P50613 AC091167.2-201ENST00000579581 588 ntBASIC18.62■□□□□ 0.57
CDK7P50613 AL359881.2-201ENST00000602973 570 ntBASIC18.62■□□□□ 0.57
CDK7P50613 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK7P50613 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
CDK7P50613 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDK7P50613 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK7P50613 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK7P50613 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDK7P50613 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CDK7P50613 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK7P50613 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDK7P50613 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
CDK7P50613 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CDK7P50613 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.61■□□□□ 0.57
CDK7P50613 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CDK7P50613 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CDK7P50613 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK7P50613 AC016027.1-202ENST00000607927 1699 ntBASIC18.61■□□□□ 0.57
CDK7P50613 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDK7P50613 TOP3BP1-201ENST00000420768 1380 ntBASIC18.61■□□□□ 0.57
CDK7P50613 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK7P50613 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK7P50613 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK7P50613 SPTLC1P1-201ENST00000447199 261 ntBASIC18.61■□□□□ 0.57
CDK7P50613 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.61■□□□□ 0.57
CDK7P50613 RN7SL692P-201ENST00000464677 288 ntBASIC18.61■□□□□ 0.57
CDK7P50613 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.61■□□□□ 0.57
CDK7P50613 AC018529.1-201ENST00000613063 361 ntBASIC18.61■□□□□ 0.57
CDK7P50613 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDK7P50613 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDK7P50613 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDK7P50613 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK7P50613 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK7P50613 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms