Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CENPFP49454 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CENPFP49454 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CENPFP49454 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CENPFP49454 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.86■□□□□ 0.61
CENPFP49454 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.86■□□□□ 0.61
CENPFP49454 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CENPFP49454 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CENPFP49454 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CENPFP49454 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.86■□□□□ 0.61
CENPFP49454 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CENPFP49454 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CENPFP49454 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CENPFP49454 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CENPFP49454 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CENPFP49454 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CENPFP49454 USP32P1-208ENST00000506594 1164 ntBASIC18.85■□□□□ 0.61
CENPFP49454 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CENPFP49454 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.85■□□□□ 0.61
CENPFP49454 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CENPFP49454 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.85■□□□□ 0.61
CENPFP49454 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.85■□□□□ 0.61
CENPFP49454 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CENPFP49454 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CENPFP49454 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.85■□□□□ 0.61
CENPFP49454 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.85■□□□□ 0.61
CENPFP49454 AC099548.2-209ENST00000480264 625 ntBASIC18.85■□□□□ 0.61
CENPFP49454 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.85■□□□□ 0.61
CENPFP49454 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.85■□□□□ 0.61
CENPFP49454 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.85■□□□□ 0.61
CENPFP49454 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CENPFP49454 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CENPFP49454 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.85■□□□□ 0.61
CENPFP49454 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CENPFP49454 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CENPFP49454 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CENPFP49454 AC007389.4-201ENST00000454674 793 ntBASIC18.85■□□□□ 0.61
CENPFP49454 AC011495.1-201ENST00000498085 584 ntBASIC18.85■□□□□ 0.61
CENPFP49454 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.85■□□□□ 0.61
CENPFP49454 RHOQP1-201ENST00000555758 579 ntBASIC18.85■□□□□ 0.61
CENPFP49454 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.85■□□□□ 0.61
CENPFP49454 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.85■□□□□ 0.61
CENPFP49454 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.85■□□□□ 0.61
CENPFP49454 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.84■□□□□ 0.61
CENPFP49454 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CENPFP49454 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CENPFP49454 AC018665.1-201ENST00000622927 1362 ntBASIC18.84■□□□□ 0.61
CENPFP49454 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CENPFP49454 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CENPFP49454 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CENPFP49454 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.84■□□□□ 0.61
CENPFP49454 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.84■□□□□ 0.61
CENPFP49454 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.84■□□□□ 0.61
CENPFP49454 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CENPFP49454 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.84■□□□□ 0.61
CENPFP49454 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CENPFP49454 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CENPFP49454 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.84■□□□□ 0.61
CENPFP49454 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CENPFP49454 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CENPFP49454 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CENPFP49454 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CENPFP49454 MTND6P24-201ENST00000440466 518 ntBASIC18.84■□□□□ 0.61
CENPFP49454 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.84■□□□□ 0.61
CENPFP49454 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.84■□□□□ 0.61
CENPFP49454 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CENPFP49454 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CENPFP49454 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CENPFP49454 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CENPFP49454 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CENPFP49454 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.84■□□□□ 0.61
CENPFP49454 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.84■□□□□ 0.61
CENPFP49454 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.83■□□□□ 0.61
CENPFP49454 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CENPFP49454 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CENPFP49454 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.83■□□□□ 0.61
CENPFP49454 KRT223P-202ENST00000449164 1292 ntBASIC18.83■□□□□ 0.61
CENPFP49454 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CENPFP49454 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CENPFP49454 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.83■□□□□ 0.61
CENPFP49454 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
CENPFP49454 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CENPFP49454 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.83■□□□□ 0.61
CENPFP49454 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.83■□□□□ 0.61
CENPFP49454 RETN-203ENST00000629642 400 ntTSL 5 BASIC18.83■□□□□ 0.61
CENPFP49454 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CENPFP49454 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CENPFP49454 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.83■□□□□ 0.6
CENPFP49454 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CENPFP49454 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.83■□□□□ 0.6
CENPFP49454 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CENPFP49454 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CENPFP49454 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CENPFP49454 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CENPFP49454 ACTBP11-201ENST00000436287 1126 ntBASIC18.83■□□□□ 0.6
CENPFP49454 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.83■□□□□ 0.6
CENPFP49454 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.83■□□□□ 0.6
CENPFP49454 AL589739.1-201ENST00000607720 493 ntBASIC18.83■□□□□ 0.6
CENPFP49454 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CENPFP49454 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms