Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.71■□□□□ 0.27
SLC1A6P48664 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SLC1A6P48664 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC1A6P48664 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A6P48664 AC005363.2-201ENST00000618631 242 ntBASIC16.71■□□□□ 0.27
SLC1A6P48664 AD001527.2-201ENST00000622994 785 ntBASIC16.71■□□□□ 0.27
SLC1A6P48664 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC1A6P48664 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC1A6P48664 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC1A6P48664 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A6P48664 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A6P48664 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A6P48664 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SLC1A6P48664 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SLC1A6P48664 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC1A6P48664 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC1A6P48664 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
SLC1A6P48664 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SLC1A6P48664 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
SLC1A6P48664 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SLC1A6P48664 AC073508.3-201ENST00000619697 1419 ntBASIC16.7■□□□□ 0.26
SLC1A6P48664 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SLC1A6P48664 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
SLC1A6P48664 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SLC1A6P48664 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC1A6P48664 AC005052.1-201ENST00000625181 2492 ntBASIC16.7■□□□□ 0.26
SLC1A6P48664 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SLC1A6P48664 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC1A6P48664 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC1A6P48664 AC006538.1-201ENST00000567905 1585 ntBASIC16.7■□□□□ 0.26
SLC1A6P48664 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SLC1A6P48664 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC1A6P48664 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 TSPY22P-201ENST00000427496 604 ntBASIC16.7■□□□□ 0.26
SLC1A6P48664 HLA-J-202ENST00000469281 1241 ntBASIC16.7■□□□□ 0.26
SLC1A6P48664 DUX4L17-201ENST00000557360 1267 ntBASIC16.7■□□□□ 0.26
SLC1A6P48664 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC1A6P48664 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
SLC1A6P48664 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC1A6P48664 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SLC1A6P48664 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SLC1A6P48664 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
SLC1A6P48664 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC1A6P48664 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC1A6P48664 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC1A6P48664 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
SLC1A6P48664 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC1A6P48664 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SLC1A6P48664 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC1A6P48664 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC1A6P48664 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC1A6P48664 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SLC1A6P48664 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC1A6P48664 AC009533.2-201ENST00000543664 586 ntBASIC16.69■□□□□ 0.26
SLC1A6P48664 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 IGHV3-41-201ENST00000613121 348 ntBASIC16.69■□□□□ 0.26
SLC1A6P48664 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC1A6P48664 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SLC1A6P48664 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SLC1A6P48664 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC1A6P48664 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC1A6P48664 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC1A6P48664 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms