Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SOX11P35716 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 AC132872.4-202ENST00000622924 2756 ntBASIC16.65■□□□□ 0.26
SOX11P35716 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX11P35716 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
SOX11P35716 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SOX11P35716 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.65■□□□□ 0.26
SOX11P35716 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SOX11P35716 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX11P35716 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX11P35716 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.65■□□□□ 0.26
SOX11P35716 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SOX11P35716 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX11P35716 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SOX11P35716 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.65■□□□□ 0.26
SOX11P35716 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SOX11P35716 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SOX11P35716 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.65■□□□□ 0.26
SOX11P35716 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SOX11P35716 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SOX11P35716 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX11P35716 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX11P35716 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SOX11P35716 DOC2GP-204ENST00000639052 2548 ntBASIC16.64■□□□□ 0.25
SOX11P35716 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SOX11P35716 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX11P35716 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX11P35716 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX11P35716 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SOX11P35716 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.64■□□□□ 0.25
SOX11P35716 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.64■□□□□ 0.25
SOX11P35716 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX11P35716 RNF216P1-203ENST00000404404 2427 ntBASIC16.64■□□□□ 0.25
SOX11P35716 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX11P35716 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX11P35716 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.64■□□□□ 0.25
SOX11P35716 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.64■□□□□ 0.25
SOX11P35716 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.64■□□□□ 0.25
SOX11P35716 MRPL3P1-201ENST00000400109 1033 ntBASIC16.64■□□□□ 0.25
SOX11P35716 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX11P35716 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.64■□□□□ 0.25
SOX11P35716 AP000347.1-202ENST00000435868 847 ntBASIC16.64■□□□□ 0.25
SOX11P35716 MTCL1P1-201ENST00000446207 792 ntBASIC16.64■□□□□ 0.25
SOX11P35716 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.64■□□□□ 0.25
SOX11P35716 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX11P35716 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.64■□□□□ 0.25
SOX11P35716 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX11P35716 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SOX11P35716 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SOX11P35716 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX11P35716 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.64■□□□□ 0.25
SOX11P35716 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.64■□□□□ 0.25
SOX11P35716 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SOX11P35716 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.64■□□□□ 0.25
SOX11P35716 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SOX11P35716 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SOX11P35716 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.63■□□□□ 0.25
SOX11P35716 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.63■□□□□ 0.25
SOX11P35716 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SOX11P35716 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
SOX11P35716 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SOX11P35716 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.63■□□□□ 0.25
SOX11P35716 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SOX11P35716 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SOX11P35716 KRT18P65-201ENST00000439811 1286 ntBASIC16.63■□□□□ 0.25
SOX11P35716 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.63■□□□□ 0.25
SOX11P35716 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
SOX11P35716 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.63■□□□□ 0.25
SOX11P35716 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.63■□□□□ 0.25
SOX11P35716 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.63■□□□□ 0.25
SOX11P35716 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.63■□□□□ 0.25
SOX11P35716 AL138831.2-201ENST00000606564 490 ntBASIC16.63■□□□□ 0.25
SOX11P35716 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms