Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CHRNA3P32297 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CHRNA3P32297 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA3P32297 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.89■□□□□ 0.46
CHRNA3P32297 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
CHRNA3P32297 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHRNA3P32297 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHRNA3P32297 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.89■□□□□ 0.45
CHRNA3P32297 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA3P32297 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
CHRNA3P32297 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
CHRNA3P32297 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.89■□□□□ 0.45
CHRNA3P32297 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.89■□□□□ 0.45
CHRNA3P32297 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA3P32297 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHRNA3P32297 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA3P32297 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA3P32297 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA3P32297 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHRNA3P32297 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHRNA3P32297 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHRNA3P32297 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA3P32297 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.89■□□□□ 0.45
CHRNA3P32297 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA3P32297 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CHRNA3P32297 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.89■□□□□ 0.45
CHRNA3P32297 SCARNA2-201ENST00000458748 420 ntBASIC17.89■□□□□ 0.45
CHRNA3P32297 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.89■□□□□ 0.45
CHRNA3P32297 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.89■□□□□ 0.45
CHRNA3P32297 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA3P32297 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA3P32297 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA3P32297 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.89■□□□□ 0.45
CHRNA3P32297 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA3P32297 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHRNA3P32297 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA3P32297 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.89■□□□□ 0.45
CHRNA3P32297 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.89■□□□□ 0.45
CHRNA3P32297 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHRNA3P32297 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA3P32297 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.89■□□□□ 0.45
CHRNA3P32297 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.88■□□□□ 0.45
CHRNA3P32297 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 FRMD8P1-201ENST00000440433 1524 ntBASIC17.88■□□□□ 0.45
CHRNA3P32297 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.88■□□□□ 0.45
CHRNA3P32297 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.88■□□□□ 0.45
CHRNA3P32297 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.88■□□□□ 0.45
CHRNA3P32297 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.88■□□□□ 0.45
CHRNA3P32297 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHRNA3P32297 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 KRT18P67-201ENST00000432816 1264 ntBASIC17.88■□□□□ 0.45
CHRNA3P32297 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CHRNA3P32297 AF186996.4-201ENST00000467186 377 ntBASIC17.88■□□□□ 0.45
CHRNA3P32297 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.88■□□□□ 0.45
CHRNA3P32297 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.88■□□□□ 0.45
CHRNA3P32297 AP000867.4-201ENST00000641616 219 ntBASIC17.88■□□□□ 0.45
CHRNA3P32297 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.88■□□□□ 0.45
CHRNA3P32297 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHRNA3P32297 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.88■□□□□ 0.45
CHRNA3P32297 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.88■□□□□ 0.45
CHRNA3P32297 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CHRNA3P32297 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CHRNA3P32297 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.88■□□□□ 0.45
CHRNA3P32297 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CHRNA3P32297 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA3P32297 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CHRNA3P32297 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
CHRNA3P32297 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CHRNA3P32297 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
CHRNA3P32297 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.87■□□□□ 0.45
CHRNA3P32297 AL135999.2-201ENST00000622438 1686 ntBASIC17.87■□□□□ 0.45
CHRNA3P32297 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.87■□□□□ 0.45
CHRNA3P32297 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms