Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.82■□□□□ 0.28
GABRB3P28472 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GABRB3P28472 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.82■□□□□ 0.28
GABRB3P28472 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GABRB3P28472 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 UNC93B7-201ENST00000509439 705 ntBASIC16.82■□□□□ 0.28
GABRB3P28472 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.82■□□□□ 0.28
GABRB3P28472 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 REXO1L3P-201ENST00000622202 1288 ntBASIC16.82■□□□□ 0.28
GABRB3P28472 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.82■□□□□ 0.28
GABRB3P28472 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GABRB3P28472 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.82■□□□□ 0.28
GABRB3P28472 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.82■□□□□ 0.28
GABRB3P28472 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
GABRB3P28472 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABRB3P28472 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.82■□□□□ 0.28
GABRB3P28472 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GABRB3P28472 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.81■□□□□ 0.28
GABRB3P28472 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 TOP3BP1-201ENST00000420768 1380 ntBASIC16.81■□□□□ 0.28
GABRB3P28472 AC002310.6-201ENST00000624451 1377 ntBASIC16.81■□□□□ 0.28
GABRB3P28472 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.81■□□□□ 0.28
GABRB3P28472 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
GABRB3P28472 SAPCD2P3-201ENST00000455031 850 ntBASIC16.81■□□□□ 0.28
GABRB3P28472 HLA-J-202ENST00000469281 1241 ntBASIC16.81■□□□□ 0.28
GABRB3P28472 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.81■□□□□ 0.28
GABRB3P28472 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GABRB3P28472 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.81■□□□□ 0.28
GABRB3P28472 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.81■□□□□ 0.28
GABRB3P28472 CLEC4GP1-201ENST00000596555 870 ntBASIC16.81■□□□□ 0.28
GABRB3P28472 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.81■□□□□ 0.28
GABRB3P28472 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GABRB3P28472 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.81■□□□□ 0.28
GABRB3P28472 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.81■□□□□ 0.28
GABRB3P28472 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.81■□□□□ 0.28
GABRB3P28472 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.81■□□□□ 0.28
GABRB3P28472 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.81■□□□□ 0.28
GABRB3P28472 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GABRB3P28472 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GABRB3P28472 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
GABRB3P28472 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GABRB3P28472 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
GABRB3P28472 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GABRB3P28472 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.8■□□□□ 0.28
GABRB3P28472 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GABRB3P28472 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GABRB3P28472 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GABRB3P28472 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GABRB3P28472 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.8■□□□□ 0.28
GABRB3P28472 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.8■□□□□ 0.28
GABRB3P28472 AC087163.2-201ENST00000457299 853 ntBASIC16.8■□□□□ 0.28
GABRB3P28472 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.8■□□□□ 0.28
GABRB3P28472 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GABRB3P28472 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GABRB3P28472 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GABRB3P28472 AC026691.1-201ENST00000602502 2017 ntBASIC16.8■□□□□ 0.28
GABRB3P28472 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.8■□□□□ 0.28
GABRB3P28472 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.8■□□□□ 0.28
GABRB3P28472 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
GABRB3P28472 LINC02199-201ENST00000506655 2702 ntBASIC16.8■□□□□ 0.28
GABRB3P28472 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms