Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 AC023141.13-201ENST00000604991 943 ntBASIC19.65■□□□□ 0.74
CALM3P0DP25 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.65■□□□□ 0.74
CALM3P0DP25 AL139011.1-202ENST00000642063 584 ntBASIC19.65■□□□□ 0.74
CALM3P0DP25 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALM3P0DP25 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CALM3P0DP25 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CALM3P0DP25 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CALM3P0DP25 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CALM3P0DP25 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CALM3P0DP25 AC012569.1-201ENST00000591191 1524 ntBASIC19.65■□□□□ 0.74
CALM3P0DP25 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALM3P0DP25 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALM3P0DP25 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALM3P0DP25 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALM3P0DP25 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALM3P0DP25 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALM3P0DP25 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CALM3P0DP25 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.64■□□□□ 0.74
CALM3P0DP25 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CALM3P0DP25 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CALM3P0DP25 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CALM3P0DP25 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.64■□□□□ 0.74
CALM3P0DP25 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.74
CALM3P0DP25 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CALM3P0DP25 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CALM3P0DP25 PRORSD1P-202ENST00000563365 2154 ntBASIC19.64■□□□□ 0.74
CALM3P0DP25 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CALM3P0DP25 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.64■□□□□ 0.74
CALM3P0DP25 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CALM3P0DP25 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CALM3P0DP25 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.64■□□□□ 0.73
CALM3P0DP25 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALM3P0DP25 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.64■□□□□ 0.73
CALM3P0DP25 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.64■□□□□ 0.73
CALM3P0DP25 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CALM3P0DP25 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
CALM3P0DP25 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.64■□□□□ 0.73
CALM3P0DP25 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.64■□□□□ 0.73
CALM3P0DP25 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.64■□□□□ 0.73
CALM3P0DP25 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.64■□□□□ 0.73
CALM3P0DP25 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALM3P0DP25 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALM3P0DP25 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALM3P0DP25 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CALM3P0DP25 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CALM3P0DP25 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALM3P0DP25 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALM3P0DP25 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALM3P0DP25 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CALM3P0DP25 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALM3P0DP25 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALM3P0DP25 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CALM3P0DP25 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALM3P0DP25 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CALM3P0DP25 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALM3P0DP25 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALM3P0DP25 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CALM3P0DP25 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CALM3P0DP25 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALM3P0DP25 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALM3P0DP25 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CALM3P0DP25 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
CALM3P0DP25 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.63■□□□□ 0.73
CALM3P0DP25 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.63■□□□□ 0.73
CALM3P0DP25 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CALM3P0DP25 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.63■□□□□ 0.73
CALM3P0DP25 AL031432.2-201ENST00000566714 459 ntBASIC19.63■□□□□ 0.73
CALM3P0DP25 AL928711.1-201ENST00000570165 459 ntBASIC19.63■□□□□ 0.73
CALM3P0DP25 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.63■□□□□ 0.73
CALM3P0DP25 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALM3P0DP25 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CALM3P0DP25 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CALM3P0DP25 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.63■□□□□ 0.73
CALM3P0DP25 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALM3P0DP25 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CALM3P0DP25 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CALM3P0DP25 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALM3P0DP25 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALM3P0DP25 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CALM3P0DP25 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALM3P0DP25 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CALM3P0DP25 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALM3P0DP25 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CALM3P0DP25 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CALM3P0DP25 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CALM3P0DP25 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALM3P0DP25 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALM3P0DP25 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.62■□□□□ 0.73
CALM3P0DP25 AP000347.1-202ENST00000435868 847 ntBASIC19.62■□□□□ 0.73
CALM3P0DP25 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.62■□□□□ 0.73
CALM3P0DP25 CYP2A7P1-201ENST00000595391 815 ntBASIC19.62■□□□□ 0.73
CALM3P0DP25 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.62■□□□□ 0.73
CALM3P0DP25 AC004877.2-201ENST00000623941 599 ntBASIC19.62■□□□□ 0.73
CALM3P0DP25 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CALM3P0DP25 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CALM3P0DP25 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.62■□□□□ 0.73
CALM3P0DP25 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CALM3P0DP25 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.62■□□□□ 0.73
CALM3P0DP25 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CALM3P0DP25 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms