Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC1P07992 AC093525.9-201ENST00000624961 1746 ntBASIC15.09■□□□□ 0.01
ERCC1P07992 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERCC1P07992 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ERCC1P07992 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.09■□□□□ 0.01
ERCC1P07992 PCDHB19P-201ENST00000570871 2371 ntBASIC15.09■□□□□ 0.01
ERCC1P07992 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ERCC1P07992 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ERCC1P07992 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.08■□□□□ 0.01
ERCC1P07992 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
ERCC1P07992 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.08■□□□□ 0.01
ERCC1P07992 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
ERCC1P07992 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ERCC1P07992 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
ERCC1P07992 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
ERCC1P07992 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.08■□□□□ 0.01
ERCC1P07992 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.08■□□□□ 0.01
ERCC1P07992 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.08■□□□□ 0.01
ERCC1P07992 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.08■□□□□ 0.01
ERCC1P07992 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
ERCC1P07992 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.08■□□□□ 0
ERCC1P07992 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.08■□□□□ 0
ERCC1P07992 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.08■□□□□ 0
ERCC1P07992 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.08■□□□□ 0
ERCC1P07992 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 COX5BP2-201ENST00000392354 334 ntBASIC15.08■□□□□ 0
ERCC1P07992 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.08■□□□□ 0
ERCC1P07992 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.08■□□□□ 0
ERCC1P07992 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 SLC25A6P4-201ENST00000586535 553 ntBASIC15.08■□□□□ 0
ERCC1P07992 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.08■□□□□ 0
ERCC1P07992 AL139288.1-201ENST00000623748 933 ntBASIC15.08■□□□□ 0
ERCC1P07992 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
ERCC1P07992 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.08■□□□□ 0
ERCC1P07992 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.08■□□□□ 0
ERCC1P07992 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.08■□□□□ 0
ERCC1P07992 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ERCC1P07992 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.07■□□□□ 0
ERCC1P07992 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.07■□□□□ 0
ERCC1P07992 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 AC007967.3-201ENST00000434308 558 ntBASIC15.07■□□□□ 0
ERCC1P07992 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.07■□□□□ 0
ERCC1P07992 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.07■□□□□ 0
ERCC1P07992 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.07■□□□□ 0
ERCC1P07992 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.07■□□□□ 0
ERCC1P07992 AC122714.2-201ENST00000502787 707 ntBASIC15.07■□□□□ 0
ERCC1P07992 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.07■□□□□ 0
ERCC1P07992 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.07■□□□□ 0
ERCC1P07992 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 AL356309.3-201ENST00000624132 1934 ntBASIC15.07■□□□□ 0
ERCC1P07992 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 AP005117.1-201ENST00000584346 1413 ntBASIC15.07■□□□□ 0
ERCC1P07992 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.07■□□□□ 0
ERCC1P07992 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.07■□□□□ 0
ERCC1P07992 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ERCC1P07992 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ERCC1P07992 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.07■□□□□ 0
ERCC1P07992 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.07■□□□□ 0
ERCC1P07992 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.06■□□□□ 0
ERCC1P07992 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ERCC1P07992 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.06■□□□□ 0
ERCC1P07992 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.06■□□□□ 0
ERCC1P07992 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
ERCC1P07992 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms