Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AP000550.4-202ENST00000639755 178 ntBASIC15.3■□□□□ 0.04
HLA-DPB1P04440 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
HLA-DPB1P04440 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 AC132872.4-202ENST00000622924 2756 ntBASIC15.29■□□□□ 0.04
HLA-DPB1P04440 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 MTCL1P1-201ENST00000446207 792 ntBASIC15.29■□□□□ 0.04
HLA-DPB1P04440 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 AL121672.3-201ENST00000608644 468 ntBASIC15.29■□□□□ 0.04
HLA-DPB1P04440 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 HYMAI-201ENST00000635591 3347 ntBASIC15.29■□□□□ 0.04
HLA-DPB1P04440 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HLA-DPB1P04440 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 AC068587.6-202ENST00000641839 5619 ntBASIC15.28■□□□□ 0.04
HLA-DPB1P04440 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 AC016734.2-201ENST00000624325 1377 ntBASIC15.28■□□□□ 0.04
HLA-DPB1P04440 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DPB1P04440 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms