Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.46■□□□□ 0.07
P04436 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.46■□□□□ 0.07
P04436 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.46■□□□□ 0.07
P04436 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.46■□□□□ 0.07
P04436 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.46■□□□□ 0.07
P04436 AC091167.2-201ENST00000579581 588 ntBASIC15.46■□□□□ 0.07
P04436 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
P04436 AC091812.2-201ENST00000619081 385 ntBASIC15.46■□□□□ 0.07
P04436 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.46■□□□□ 0.07
P04436 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
P04436 AC134684.3-201ENST00000641758 218 ntBASIC15.46■□□□□ 0.07
P04436 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.46■□□□□ 0.07
P04436 AC141586.5-201ENST00000624546 2050 ntBASIC15.46■□□□□ 0.07
P04436 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
P04436 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.46■□□□□ 0.07
P04436 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
P04436 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.46■□□□□ 0.07
P04436 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
P04436 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.46■□□□□ 0.07
P04436 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.46■□□□□ 0.07
P04436 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
P04436 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.46■□□□□ 0.07
P04436 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
P04436 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
P04436 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
P04436 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
P04436 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
P04436 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
P04436 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
P04436 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
P04436 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.46■□□□□ 0.06
P04436 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
P04436 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
P04436 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
P04436 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
P04436 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
P04436 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
P04436 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
P04436 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
P04436 ELL2P1-201ENST00000413990 1906 ntBASIC15.45■□□□□ 0.06
P04436 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P04436 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
P04436 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
P04436 KRT8P49-201ENST00000604166 1432 ntBASIC15.45■□□□□ 0.06
P04436 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P04436 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
P04436 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
P04436 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P04436 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P04436 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.45■□□□□ 0.06
P04436 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.45■□□□□ 0.06
P04436 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
P04436 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.45■□□□□ 0.06
P04436 YBX1P5-201ENST00000509441 847 ntBASIC15.45■□□□□ 0.06
P04436 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.45■□□□□ 0.06
P04436 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.45■□□□□ 0.06
P04436 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.45■□□□□ 0.06
P04436 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.45■□□□□ 0.06
P04436 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.45■□□□□ 0.06
P04436 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P04436 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P04436 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.45■□□□□ 0.06
P04436 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
P04436 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.45■□□□□ 0.06
P04436 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
P04436 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.45■□□□□ 0.06
P04436 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.44■□□□□ 0.06
P04436 TUBB8P12-201ENST00000308911 1335 ntBASIC15.44■□□□□ 0.06
P04436 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 TUBB7P-202ENST00000428444 1305 ntBASIC15.44■□□□□ 0.06
P04436 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 TUBB8P7-204ENST00000567960 1332 ntBASIC15.44■□□□□ 0.06
P04436 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
P04436 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.44■□□□□ 0.06
P04436 PP12613-201ENST00000424958 2230 ntBASIC15.44■□□□□ 0.06
P04436 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
P04436 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
P04436 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.44■□□□□ 0.06
P04436 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
P04436 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
P04436 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.44■□□□□ 0.06
P04436 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.44■□□□□ 0.06
P04436 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.44■□□□□ 0.06
P04436 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
P04436 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
P04436 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms