Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.21■□□□□ 0.51
TUBB4AP04350 KRT18P48-201ENST00000434763 852 ntBASIC18.21■□□□□ 0.51
TUBB4AP04350 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.21■□□□□ 0.51
TUBB4AP04350 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.21■□□□□ 0.51
TUBB4AP04350 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.21■□□□□ 0.51
TUBB4AP04350 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.21■□□□□ 0.51
TUBB4AP04350 AP001412.1-201ENST00000608405 714 ntBASIC18.21■□□□□ 0.51
TUBB4AP04350 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TUBB4AP04350 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.21■□□□□ 0.51
TUBB4AP04350 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.21■□□□□ 0.51
TUBB4AP04350 AL135999.2-201ENST00000622438 1686 ntBASIC18.21■□□□□ 0.51
TUBB4AP04350 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBB4AP04350 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TUBB4AP04350 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TUBB4AP04350 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.5
TUBB4AP04350 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.5
TUBB4AP04350 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
TUBB4AP04350 GGT4P-201ENST00000623672 1708 ntBASIC18.2■□□□□ 0.5
TUBB4AP04350 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TUBB4AP04350 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TUBB4AP04350 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TUBB4AP04350 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TUBB4AP04350 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 AP000523.1-201ENST00000398242 1049 ntBASIC18.2■□□□□ 0.5
TUBB4AP04350 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TUBB4AP04350 AC103564.2-201ENST00000432853 1299 ntBASIC18.2■□□□□ 0.5
TUBB4AP04350 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.2■□□□□ 0.5
TUBB4AP04350 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.2■□□□□ 0.5
TUBB4AP04350 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBB4AP04350 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.2■□□□□ 0.5
TUBB4AP04350 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.2■□□□□ 0.5
TUBB4AP04350 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBB4AP04350 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBB4AP04350 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.2■□□□□ 0.5
TUBB4AP04350 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
TUBB4AP04350 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBB4AP04350 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBB4AP04350 AC006449.6-201ENST00000612330 2296 ntBASIC18.19■□□□□ 0.5
TUBB4AP04350 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBB4AP04350 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBB4AP04350 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TUBB4AP04350 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBB4AP04350 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.19■□□□□ 0.5
TUBB4AP04350 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBB4AP04350 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TUBB4AP04350 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
TUBB4AP04350 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TUBB4AP04350 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.19■□□□□ 0.5
TUBB4AP04350 AC122714.2-201ENST00000502787 707 ntBASIC18.19■□□□□ 0.5
TUBB4AP04350 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.19■□□□□ 0.5
TUBB4AP04350 STK25P1-201ENST00000585406 838 ntBASIC18.19■□□□□ 0.5
TUBB4AP04350 Z99916.2-201ENST00000604037 246 ntBASIC18.19■□□□□ 0.5
TUBB4AP04350 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBB4AP04350 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBB4AP04350 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.19■□□□□ 0.5
TUBB4AP04350 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBB4AP04350 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBB4AP04350 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBB4AP04350 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBB4AP04350 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
TUBB4AP04350 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TUBB4AP04350 AL021920.2-201ENST00000624828 1351 ntBASIC18.18■□□□□ 0.5
TUBB4AP04350 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBB4AP04350 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TUBB4AP04350 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
TUBB4AP04350 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBB4AP04350 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBB4AP04350 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBB4AP04350 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBB4AP04350 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBB4AP04350 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBB4AP04350 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBB4AP04350 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBB4AP04350 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TUBB4AP04350 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.18■□□□□ 0.5
TUBB4AP04350 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBB4AP04350 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBB4AP04350 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TUBB4AP04350 RPS2P55-201ENST00000397318 883 ntBASIC18.18■□□□□ 0.5
TUBB4AP04350 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBB4AP04350 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBB4AP04350 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TUBB4AP04350 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms