Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PRICKLE3O43900 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PRICKLE3O43900 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.23■□□□□ 0.19
PRICKLE3O43900 MCCD1P2-201ENST00000423228 335 ntBASIC16.23■□□□□ 0.19
PRICKLE3O43900 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.23■□□□□ 0.19
PRICKLE3O43900 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.23■□□□□ 0.19
PRICKLE3O43900 AL031432.2-201ENST00000566714 459 ntBASIC16.23■□□□□ 0.19
PRICKLE3O43900 AL928711.1-201ENST00000570165 459 ntBASIC16.23■□□□□ 0.19
PRICKLE3O43900 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.23■□□□□ 0.19
PRICKLE3O43900 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PRICKLE3O43900 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.23■□□□□ 0.19
PRICKLE3O43900 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.23■□□□□ 0.19
PRICKLE3O43900 AC012569.1-201ENST00000591191 1524 ntBASIC16.23■□□□□ 0.19
PRICKLE3O43900 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
PRICKLE3O43900 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PRICKLE3O43900 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.23■□□□□ 0.19
PRICKLE3O43900 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 AC087641.1-201ENST00000557561 1021 ntBASIC16.22■□□□□ 0.19
PRICKLE3O43900 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 SNX33P1-201ENST00000592116 1762 ntBASIC16.22■□□□□ 0.19
PRICKLE3O43900 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.22■□□□□ 0.19
PRICKLE3O43900 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRICKLE3O43900 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PRICKLE3O43900 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRICKLE3O43900 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.21■□□□□ 0.19
PRICKLE3O43900 BCL2-203ENST00000589955 5011 ntBASIC16.21■□□□□ 0.19
PRICKLE3O43900 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PRICKLE3O43900 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRICKLE3O43900 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRICKLE3O43900 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRICKLE3O43900 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRICKLE3O43900 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.21■□□□□ 0.19
PRICKLE3O43900 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRICKLE3O43900 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRICKLE3O43900 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.21■□□□□ 0.19
PRICKLE3O43900 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
PRICKLE3O43900 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PRICKLE3O43900 AC074386.1-202ENST00000463561 864 ntBASIC16.21■□□□□ 0.19
PRICKLE3O43900 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PRICKLE3O43900 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRICKLE3O43900 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.21■□□□□ 0.19
PRICKLE3O43900 AC002347.1-201ENST00000569543 541 ntBASIC16.21■□□□□ 0.19
PRICKLE3O43900 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.21■□□□□ 0.19
PRICKLE3O43900 CYP2A7P1-201ENST00000595391 815 ntBASIC16.21■□□□□ 0.19
PRICKLE3O43900 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.21■□□□□ 0.19
PRICKLE3O43900 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.21■□□□□ 0.19
PRICKLE3O43900 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRICKLE3O43900 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRICKLE3O43900 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms