Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC188H7C350 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC188H7C350 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC188H7C350 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC188H7C350 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC188H7C350 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC188H7C350 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC188H7C350 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC188H7C350 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC188H7C350 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC188H7C350 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC188H7C350 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC188H7C350 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC188H7C350 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC188H7C350 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC188H7C350 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC188H7C350 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC188H7C350 AP002414.1-201ENST00000391405 1147 ntBASIC17.65■□□□□ 0.42
CCDC188H7C350 AL645929.1-201ENST00000420084 975 ntBASIC17.65■□□□□ 0.42
CCDC188H7C350 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CCDC188H7C350 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC188H7C350 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CCDC188H7C350 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC188H7C350 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC188H7C350 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC188H7C350 AC013467.2-201ENST00000605472 835 ntBASIC17.65■□□□□ 0.42
CCDC188H7C350 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC188H7C350 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC188H7C350 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC188H7C350 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC188H7C350 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC188H7C350 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC188H7C350 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC188H7C350 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC188H7C350 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC188H7C350 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC188H7C350 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC188H7C350 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC188H7C350 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC188H7C350 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC188H7C350 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
CCDC188H7C350 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC188H7C350 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC188H7C350 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCDC188H7C350 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC188H7C350 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC188H7C350 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC188H7C350 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC188H7C350 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC188H7C350 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC188H7C350 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC188H7C350 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC188H7C350 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC188H7C350 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC188H7C350 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC188H7C350 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC188H7C350 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC188H7C350 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC188H7C350 PAUPAR-201ENST00000630360 2965 ntBASIC17.64■□□□□ 0.41
CCDC188H7C350 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC188H7C350 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC188H7C350 KRT8P49-201ENST00000604166 1432 ntBASIC17.64■□□□□ 0.41
CCDC188H7C350 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC188H7C350 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCDC188H7C350 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC188H7C350 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC188H7C350 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CCDC188H7C350 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC188H7C350 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC188H7C350 NUS1P1-201ENST00000446295 882 ntBASIC17.63■□□□□ 0.41
CCDC188H7C350 AC092647.4-201ENST00000457211 535 ntBASIC17.63■□□□□ 0.41
CCDC188H7C350 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC188H7C350 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC188H7C350 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC188H7C350 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC188H7C350 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC188H7C350 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC188H7C350 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC188H7C350 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC188H7C350 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms