Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LYRM9A8MSI8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LYRM9A8MSI8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LYRM9A8MSI8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.1□□□□□ -0.47
LYRM9A8MSI8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
LYRM9A8MSI8 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LYRM9A8MSI8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.1□□□□□ -0.47
LYRM9A8MSI8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LYRM9A8MSI8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
LYRM9A8MSI8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LYRM9A8MSI8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.1□□□□□ -0.47
LYRM9A8MSI8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 FAM185BP-201ENST00000443595 716 ntBASIC12.09□□□□□ -0.47
LYRM9A8MSI8 HCG4B-203ENST00000450128 991 ntBASIC12.09□□□□□ -0.47
LYRM9A8MSI8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 AC096734.2-201ENST00000562054 433 ntBASIC12.09□□□□□ -0.47
LYRM9A8MSI8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 AC064836.3-201ENST00000607928 673 ntBASIC12.09□□□□□ -0.47
LYRM9A8MSI8 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 REXO1L3P-201ENST00000622202 1288 ntBASIC12.09□□□□□ -0.47
LYRM9A8MSI8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 AC092053.1-201ENST00000605787 1936 ntBASIC12.09□□□□□ -0.47
LYRM9A8MSI8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
LYRM9A8MSI8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
LYRM9A8MSI8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
LYRM9A8MSI8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.08□□□□□ -0.48
LYRM9A8MSI8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 SLC25A1P1-201ENST00000528351 927 ntBASIC12.08□□□□□ -0.48
LYRM9A8MSI8 AC107918.2-201ENST00000530817 355 ntBASIC12.08□□□□□ -0.48
LYRM9A8MSI8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 DUX4L17-201ENST00000557360 1267 ntBASIC12.08□□□□□ -0.48
LYRM9A8MSI8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC12.08□□□□□ -0.48
LYRM9A8MSI8 AL645728.2-201ENST00000641974 660 ntBASIC12.08□□□□□ -0.48
LYRM9A8MSI8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms