Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 RBM17P3-201ENST00000417687 1192 ntBASIC15.9■□□□□ 0.14
CLCA1A8K7I4 AC096633.1-201ENST00000422446 749 ntBASIC15.9■□□□□ 0.14
CLCA1A8K7I4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLCA1A8K7I4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CLCA1A8K7I4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.89■□□□□ 0.13
CLCA1A8K7I4 RNF216P1-203ENST00000404404 2427 ntBASIC15.89■□□□□ 0.13
CLCA1A8K7I4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 CYP2T1P-202ENST00000641596 2535 ntBASIC15.89■□□□□ 0.13
CLCA1A8K7I4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 MRPL3P1-201ENST00000400109 1033 ntBASIC15.89■□□□□ 0.13
CLCA1A8K7I4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 MTDHP3-201ENST00000594186 672 ntBASIC15.89■□□□□ 0.13
CLCA1A8K7I4 AC023511.2-201ENST00000618803 211 ntBASIC15.89■□□□□ 0.13
CLCA1A8K7I4 AL355877.3-201ENST00000622820 899 ntBASIC15.89■□□□□ 0.13
CLCA1A8K7I4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 AC078925.2-201ENST00000624013 1973 ntBASIC15.89■□□□□ 0.13
CLCA1A8K7I4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.89■□□□□ 0.13
CLCA1A8K7I4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 AC010460.3-201ENST00000511359 1579 ntBASIC15.88■□□□□ 0.13
CLCA1A8K7I4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.88■□□□□ 0.13
CLCA1A8K7I4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms